Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 AC019185.1-201ENST00000442718 389 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.52□□□□□ -1.37
CCNA1P78396 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 AC090589.1-201ENST00000473109 362 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 RPL15P21-201ENST00000495592 567 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 AC147055.3-201ENST00000510547 851 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.52□□□□□ -1.37
CCNA1P78396 RN7SKP99-201ENST00000517028 307 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.52□□□□□ -1.37
CCNA1P78396 HMGN2P6-201ENST00000551091 273 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.52□□□□□ -1.37
CCNA1P78396 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.52□□□□□ -1.37
CCNA1P78396 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.52□□□□□ -1.37
CCNA1P78396 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AL136295.6-201ENST00000610486 658 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.52□□□□□ -1.37
CCNA1P78396 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCNA1P78396 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.52□□□□□ -1.37
CCNA1P78396 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.52□□□□□ -1.37
CCNA1P78396 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNA1P78396 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNA1P78396 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CCNA1P78396 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNA1P78396 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCNA1P78396 AP003170.5-201ENST00000397185 335 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNA1P78396 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCNA1P78396 AC096775.1-201ENST00000437724 448 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 VDAC2P4-201ENST00000452925 711 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 RN7SL826P-201ENST00000479724 288 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 RPS4XP1-201ENST00000482189 787 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 NDUFA5P12-201ENST00000503796 343 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.51□□□□□ -1.37
CCNA1P78396 AC105384.2-201ENST00000508433 640 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCNA1P78396 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNA1P78396 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.51□□□□□ -1.37
CCNA1P78396 MIR4433B-201ENST00000581329 102 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 AC107993.1-201ENST00000591343 684 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCNA1P78396 AC012616.1-201ENST00000600294 197 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 WBP1LP8-201ENST00000617401 327 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 AL731532.1-201ENST00000623972 4236 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCNA1P78396 AC006511.3-201ENST00000624929 1783 ntBASIC6.51□□□□□ -1.37
CCNA1P78396 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.51□□□□□ -1.37
CCNA1P78396 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.51□□□□□ -1.37
CCNA1P78396 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CCNA1P78396 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCNA1P78396 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CCNA1P78396 AC005294.1-201ENST00000355509 281 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNA1P78396 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.5□□□□□ -1.37
CCNA1P78396 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNA1P78396 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNA1P78396 AC015977.1-201ENST00000418887 292 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 OR5W1P-201ENST00000423705 938 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 CYCSP6-201ENST00000434498 302 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 AC006335.2-201ENST00000437993 330 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 AL645937.3-201ENST00000453647 936 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 AL355032.1-201ENST00000472981 438 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 AC018558.5-201ENST00000565840 952 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 AP001885.1-201ENST00000621658 558 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCNA1P78396 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 AC116158.1-201ENST00000560231 2129 ntBASIC6.5□□□□□ -1.37
CCNA1P78396 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
CCNA1P78396 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNA1P78396 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNA1P78396 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
CCNA1P78396 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms