Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UBA52P62987 RNA5SP242-201ENST00000364171 118 ntBASIC4.97□□□□□ -1.61
UBA52P62987 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UBA52P62987 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.97□□□□□ -1.61
UBA52P62987 GNG5P5-201ENST00000420444 220 ntBASIC4.97□□□□□ -1.61
UBA52P62987 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 BRWD1P3-201ENST00000428816 390 ntBASIC4.97□□□□□ -1.61
UBA52P62987 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 PPIAP10-201ENST00000438675 458 ntBASIC4.97□□□□□ -1.61
UBA52P62987 SEPT14P12-201ENST00000442280 560 ntBASIC4.97□□□□□ -1.61
UBA52P62987 HMGN1P36-201ENST00000446623 298 ntBASIC4.97□□□□□ -1.61
UBA52P62987 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 AC005077.1-201ENST00000449226 375 ntBASIC4.97□□□□□ -1.61
UBA52P62987 FRG2FP-204ENST00000453982 852 ntBASIC4.97□□□□□ -1.61
UBA52P62987 RANP2-201ENST00000456833 229 ntBASIC4.97□□□□□ -1.61
UBA52P62987 RN7SL72P-201ENST00000460697 269 ntBASIC4.97□□□□□ -1.61
UBA52P62987 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 RN7SL717P-201ENST00000478343 297 ntBASIC4.97□□□□□ -1.61
UBA52P62987 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.97□□□□□ -1.61
UBA52P62987 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA52P62987 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA52P62987 AC020978.7-201ENST00000575953 1187 ntBASIC4.97□□□□□ -1.61
UBA52P62987 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 MIR4433B-201ENST00000581329 102 ntBASIC4.97□□□□□ -1.61
UBA52P62987 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA52P62987 AL162574.1-201ENST00000615702 950 ntBASIC4.97□□□□□ -1.61
UBA52P62987 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA52P62987 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
UBA52P62987 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA52P62987 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA52P62987 AC018809.2-201ENST00000602436 3823 ntBASIC4.96□□□□□ -1.61
UBA52P62987 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
UBA52P62987 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
UBA52P62987 AC090220.1-201ENST00000593078 1699 ntBASIC4.96□□□□□ -1.61
UBA52P62987 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.96□□□□□ -1.61
UBA52P62987 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
UBA52P62987 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.96□□□□□ -1.62
UBA52P62987 TMSB4XP2-201ENST00000335179 210 ntBASIC4.96□□□□□ -1.62
UBA52P62987 RNFT1P3-201ENST00000340898 1052 ntBASIC4.96□□□□□ -1.62
UBA52P62987 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 RNU1-49P-201ENST00000363468 159 ntBASIC4.96□□□□□ -1.62
UBA52P62987 RN7SKP292-201ENST00000365522 317 ntBASIC4.96□□□□□ -1.62
UBA52P62987 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
UBA52P62987 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA52P62987 RN7SKP286-201ENST00000410894 299 ntBASIC4.96□□□□□ -1.62
UBA52P62987 RN7SKP279-201ENST00000411383 298 ntBASIC4.96□□□□□ -1.62
UBA52P62987 MARK2P12-201ENST00000420129 585 ntBASIC4.96□□□□□ -1.62
UBA52P62987 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA52P62987 GAPDHP48-201ENST00000436626 961 ntBASIC4.96□□□□□ -1.62
UBA52P62987 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 RPS23P9-201ENST00000448848 438 ntBASIC4.96□□□□□ -1.62
UBA52P62987 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA52P62987 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA52P62987 RPS4XP12-201ENST00000461747 709 ntBASIC4.96□□□□□ -1.62
UBA52P62987 AC110749.1-201ENST00000462007 357 ntBASIC4.96□□□□□ -1.62
UBA52P62987 Y_RNA.710-201ENST00000516975 110 ntBASIC4.96□□□□□ -1.62
UBA52P62987 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA52P62987 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 OR8A2P-201ENST00000528631 952 ntBASIC4.96□□□□□ -1.62
UBA52P62987 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA52P62987 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
UBA52P62987 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA52P62987 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA52P62987 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.96□□□□□ -1.62
UBA52P62987 AC022106.1-201ENST00000612834 766 ntBASIC4.96□□□□□ -1.62
UBA52P62987 AL512624.1-201ENST00000613638 469 ntBASIC4.96□□□□□ -1.62
UBA52P62987 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 AL049767.1-202ENST00000637826 242 ntBASIC4.96□□□□□ -1.62
UBA52P62987 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms