Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AZGP1P2-201ENST00000454506 345 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 PSAT1P4-201ENST00000466500 526 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 RPS4XP17-201ENST00000479057 754 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 RPL32P33-201ENST00000487023 394 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN12P56749 AC092709.1-201ENST00000521355 1045 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 AC130364.2-201ENST00000528639 604 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN12P56749 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN12P56749 MIR4776-2-201ENST00000580204 80 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN12P56749 MIR7853-201ENST00000584820 132 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN12P56749 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN12P56749 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN12P56749 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN12P56749 MIR6809-201ENST00000612189 116 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN12P56749 AL357140.4-201ENST00000636827 412 ntBASIC4.83□□□□□ -1.64
CLDN12P56749 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN12P56749 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLDN12P56749 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN12P56749 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 AL354854.1-201ENST00000455940 1363 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC092376.2-201ENST00000622621 4116 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLDN12P56749 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 MIR130B-202ENST00000385018 82 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 RNA5SP241-201ENST00000391326 114 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 EI24P3-201ENST00000399046 1062 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 PPIAP9-201ENST00000403866 498 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 RNA5SP431-201ENST00000410312 120 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.82□□□□□ -1.64
CLDN12P56749 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.82□□□□□ -1.64
CLDN12P56749 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC005077.1-201ENST00000449226 375 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 RN7SL188P-201ENST00000469842 285 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC073610.1-201ENST00000489971 396 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 RN7SL57P-201ENST00000493687 290 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 EIF3LP3-201ENST00000495197 822 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC112184.1-201ENST00000505179 312 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 DUTP7-201ENST00000507982 486 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC074255.1-201ENST00000511259 501 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 GAPDHP71-201ENST00000511530 1003 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN12P56749 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC008126.1-201ENST00000549019 480 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 AC006530.1-201ENST00000555980 571 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AL078601.3-201ENST00000573303 535 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC005244.1-201ENST00000582566 339 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC008507.3-201ENST00000585753 472 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC009237.13-201ENST00000603193 276 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC108738.1-201ENST00000603703 237 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 Z95327.3-201ENST00000610385 572 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 MIR6883-201ENST00000614952 78 ntBASIC4.82□□□□□ -1.64
CLDN12P56749 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
CLDN12P56749 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN12P56749 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN12P56749 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN12P56749 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
CLDN12P56749 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN12P56749 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN12P56749 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN12P56749 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CLDN12P56749 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN12P56749 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN12P56749 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms