Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 AL663074.2-201ENST00000440621 479 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AC114878.1-201ENST00000441166 358 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 PFN1P6-201ENST00000476786 399 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AC093827.1-201ENST00000480094 861 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
HDAC4P56524 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 LSM3P4-201ENST00000502948 309 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC4P56524 AC079905.1-201ENST00000549280 475 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 LINC00556-201ENST00000569603 412 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC4P56524 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC4P56524 AC090236.2-201ENST00000587933 1101 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC4P56524 AL136131.3-201ENST00000607600 188 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 AC245014.3-201ENST00000618589 347 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AL359742.1-201ENST00000622497 540 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AC020923.1-201ENST00000624021 917 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HDAC4P56524 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 CASC19-238ENST00000641523 1558 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HDAC4P56524 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HDAC4P56524 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 AF287957.1-201ENST00000607368 1595 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HDAC4P56524 MIR133A2-201ENST00000347538 102 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC096644.3-201ENST00000416788 338 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 AC092651.1-201ENST00000426110 312 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC4P56524 AL356390.1-201ENST00000455684 397 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 RN7SL193P-201ENST00000491708 276 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC002456.2-201ENST00000509356 380 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 OR4A42P-201ENST00000531397 938 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 AC007956.1-201ENST00000555623 542 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.16□□□□□ -1.42
HDAC4P56524 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 KATNBL1P1-201ENST00000605192 748 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 RNU6-84P-201ENST00000607737 102 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HDAC4P56524 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AC008691.1-209ENST00000642094 814 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC4P56524 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.16□□□□□ -1.42
HDAC4P56524 AL137141.1-201ENST00000624622 4836 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 AP005432.1-201ENST00000580891 3485 ntBASIC6.16□□□□□ -1.42
HDAC4P56524 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HDAC4P56524 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HDAC4P56524 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.16□□□□□ -1.42
HDAC4P56524 Z83820.1-201ENST00000456978 1499 ntBASIC6.15□□□□□ -1.42
HDAC4P56524 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.15□□□□□ -1.42
HDAC4P56524 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.15□□□□□ -1.42
HDAC4P56524 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HDAC4P56524 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
HDAC4P56524 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HDAC4P56524 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.15□□□□□ -1.42
HDAC4P56524 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HDAC4P56524 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HDAC4P56524 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HDAC4P56524 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.15□□□□□ -1.42
HDAC4P56524 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.15□□□□□ -1.42
HDAC4P56524 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.15□□□□□ -1.42
HDAC4P56524 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.15□□□□□ -1.42
HDAC4P56524 MTATP6P11-201ENST00000428071 670 ntBASIC6.15□□□□□ -1.42
HDAC4P56524 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.15□□□□□ -1.42
HDAC4P56524 AC069154.1-201ENST00000432914 542 ntBASIC6.15□□□□□ -1.42
HDAC4P56524 AC073410.1-201ENST00000435125 589 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms