Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC005034.3-201ENST00000604845 1747 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC132825.1-201ENST00000463573 2247 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC022819.1-201ENST00000563495 3910 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
SMARCA4P51532 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC006600.2-201ENST00000624834 2506 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 SNORD1C-201ENST00000363315 78 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.67□□□□□ -0.86
SMARCA4P51532 RPL7P56-201ENST00000429441 717 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 USP24P1-201ENST00000433802 779 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC073264.2-201ENST00000448886 166 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 NDUFA5P8-201ENST00000449019 346 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.67□□□□□ -0.86
SMARCA4P51532 snoU13.20-201ENST00000459180 104 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 RN7SKP98-201ENST00000517070 156 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 NXF4-202ENST00000416098 1465 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA4P51532 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA4P51532 AC007996.1-201ENST00000620414 2821 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA4P51532 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SMARCA4P51532 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA4P51532 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SMARCA4P51532 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SMARCA4P51532 RNU6-398P-201ENST00000384143 109 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 MIR105-1-201ENST00000385222 81 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC9.66□□□□□ -0.86
SMARCA4P51532 AL365220.1-201ENST00000432923 399 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.66□□□□□ -0.86
SMARCA4P51532 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA4P51532 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA4P51532 AP000797.2-201ENST00000475768 606 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.66□□□□□ -0.86
SMARCA4P51532 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.66□□□□□ -0.86
SMARCA4P51532 AC096754.1-201ENST00000508904 818 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 AL356752.1-201ENST00000615844 593 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 AC010435.1-201ENST00000623353 1177 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC9.66□□□□□ -0.86
SMARCA4P51532 AC073869.10-201ENST00000642016 354 ntBASIC9.66□□□□□ -0.86
SMARCA4P51532 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.66□□□□□ -0.86
SMARCA4P51532 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.66□□□□□ -0.86
SMARCA4P51532 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SMARCA4P51532 NLRP3P1-201ENST00000622303 1785 ntBASIC9.65□□□□□ -0.86
SMARCA4P51532 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SMARCA4P51532 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SMARCA4P51532 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.65□□□□□ -0.86
SMARCA4P51532 RNU1-136P-201ENST00000384181 164 ntBASIC9.65□□□□□ -0.86
SMARCA4P51532 AC096921.1-201ENST00000411661 375 ntBASIC9.65□□□□□ -0.86
SMARCA4P51532 NPM1P40-201ENST00000412758 733 ntBASIC9.65□□□□□ -0.86
SMARCA4P51532 RNF10P1-201ENST00000418589 369 ntBASIC9.65□□□□□ -0.86
SMARCA4P51532 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.65□□□□□ -0.86
SMARCA4P51532 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC9.65□□□□□ -0.86
SMARCA4P51532 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.65□□□□□ -0.86
SMARCA4P51532 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.65□□□□□ -0.86
SMARCA4P51532 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC9.65□□□□□ -0.86
SMARCA4P51532 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SMARCA4P51532 AL353796.1-201ENST00000561542 3241 ntBASIC9.65□□□□□ -0.86
SMARCA4P51532 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.65□□□□□ -0.86
SMARCA4P51532 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SMARCA4P51532 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SMARCA4P51532 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
SMARCA4P51532 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SMARCA4P51532 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 AL356967.1-201ENST00000406305 431 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.64□□□□□ -0.87
SMARCA4P51532 RNA5SP251-201ENST00000410614 137 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.64□□□□□ -0.87
SMARCA4P51532 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 BTF3P13-201ENST00000513224 490 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC9.64□□□□□ -0.87
SMARCA4P51532 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.64□□□□□ -0.87
SMARCA4P51532 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.64□□□□□ -0.87
SMARCA4P51532 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
SMARCA4P51532 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms