Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 CASC19-248ENST00000641674 1356 ntBASIC5.04□□□□□ -1.6
SRP9P49458 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.04□□□□□ -1.6
SRP9P49458 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 PSG10P-201ENST00000501199 1500 ntBASIC5.04□□□□□ -1.6
SRP9P49458 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SRP9P49458 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 AC027088.4-201ENST00000611559 1947 ntBASIC5.04□□□□□ -1.6
SRP9P49458 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 SELENOWP1-201ENST00000322792 252 ntBASIC5.04□□□□□ -1.6
SRP9P49458 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 RN7SKP275-201ENST00000364626 301 ntBASIC5.04□□□□□ -1.6
SRP9P49458 SUGT1P2-201ENST00000379452 992 ntBASIC5.04□□□□□ -1.6
SRP9P49458 RNA5SP91-201ENST00000390902 119 ntBASIC5.04□□□□□ -1.6
SRP9P49458 OR7E156P-201ENST00000400303 464 ntBASIC5.04□□□□□ -1.6
SRP9P49458 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.04□□□□□ -1.6
SRP9P49458 RPL35AP3-201ENST00000414680 288 ntBASIC5.04□□□□□ -1.6
SRP9P49458 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
SRP9P49458 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.04□□□□□ -1.6
SRP9P49458 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.04□□□□□ -1.6
SRP9P49458 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.04□□□□□ -1.6
SRP9P49458 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.04□□□□□ -1.6
SRP9P49458 GAPDHP14-201ENST00000450472 937 ntBASIC5.04□□□□□ -1.6
SRP9P49458 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.04□□□□□ -1.6
SRP9P49458 GEMIN2P1-201ENST00000454246 752 ntBASIC5.04□□□□□ -1.6
SRP9P49458 RN7SL269P-201ENST00000467795 305 ntBASIC5.04□□□□□ -1.6
SRP9P49458 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.04□□□□□ -1.6
SRP9P49458 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.04□□□□□ -1.6
SRP9P49458 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.04□□□□□ -1.6
SRP9P49458 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 AC134669.1-201ENST00000581275 672 ntBASIC5.04□□□□□ -1.6
SRP9P49458 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.04□□□□□ -1.6
SRP9P49458 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.04□□□□□ -1.6
SRP9P49458 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.04□□□□□ -1.6
SRP9P49458 AC067773.1-201ENST00000603284 1094 ntBASIC5.04□□□□□ -1.6
SRP9P49458 AC145423.1-201ENST00000605712 336 ntBASIC5.04□□□□□ -1.6
SRP9P49458 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 AC103703.1-201ENST00000634783 663 ntBASIC5.04□□□□□ -1.6
SRP9P49458 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.04□□□□□ -1.6
SRP9P49458 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.03□□□□□ -1.6
SRP9P49458 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SRP9P49458 MFSD8-239ENST00000641590 2479 ntBASIC5.03□□□□□ -1.6
SRP9P49458 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.03□□□□□ -1.6
SRP9P49458 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.03□□□□□ -1.6
SRP9P49458 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.03□□□□□ -1.6
SRP9P49458 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SRP9P49458 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SRP9P49458 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.03□□□□□ -1.6
SRP9P49458 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SRP9P49458 ICE2P1-201ENST00000512800 1849 ntBASIC5.03□□□□□ -1.6
SRP9P49458 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SRP9P49458 RNFT1P3-201ENST00000340898 1052 ntBASIC5.03□□□□□ -1.6
SRP9P49458 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SRP9P49458 AC023490.2-201ENST00000359859 470 ntBASIC5.03□□□□□ -1.6
SRP9P49458 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SRP9P49458 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SRP9P49458 RAB5CP1-201ENST00000395972 580 ntBASIC5.03□□□□□ -1.6
SRP9P49458 AL358178.1-201ENST00000407698 397 ntBASIC5.03□□□□□ -1.6
SRP9P49458 RN7SKP240-201ENST00000410583 375 ntBASIC5.03□□□□□ -1.6
SRP9P49458 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.03□□□□□ -1.6
SRP9P49458 HYALP1-201ENST00000417674 1279 ntBASIC5.03□□□□□ -1.6
SRP9P49458 RPS4XP5-201ENST00000419038 768 ntBASIC5.03□□□□□ -1.6
SRP9P49458 KIF4CP-201ENST00000422742 1279 ntBASIC5.03□□□□□ -1.6
SRP9P49458 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.03□□□□□ -1.6
SRP9P49458 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
SRP9P49458 HMGN2P27-201ENST00000427352 270 ntBASIC5.03□□□□□ -1.6
SRP9P49458 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.03□□□□□ -1.6
SRP9P49458 VN1R110P-201ENST00000438988 971 ntBASIC5.03□□□□□ -1.6
SRP9P49458 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.03□□□□□ -1.6
SRP9P49458 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SRP9P49458 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.03□□□□□ -1.6
SRP9P49458 CST12P-201ENST00000457644 362 ntBASIC5.03□□□□□ -1.6
SRP9P49458 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.03□□□□□ -1.6
SRP9P49458 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.03□□□□□ -1.6
SRP9P49458 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.03□□□□□ -1.6
SRP9P49458 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.03□□□□□ -1.6
SRP9P49458 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SRP9P49458 MIR2117-201ENST00000516780 80 ntBASIC5.03□□□□□ -1.6
SRP9P49458 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.03□□□□□ -1.6
SRP9P49458 OR7E158P-201ENST00000524483 910 ntBASIC5.03□□□□□ -1.6
SRP9P49458 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.03□□□□□ -1.6
SRP9P49458 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.03□□□□□ -1.6
SRP9P49458 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms