Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.15□□□□□ -1.1
RXRBP28702 LYZ-203ENST00000549690 669 ntTSL 2 BASIC8.15□□□□□ -1.1
RXRBP28702 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.15□□□□□ -1.1
RXRBP28702 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
RXRBP28702 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 AC087763.1-201ENST00000603391 286 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RNF138P2-201ENST00000603490 592 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AC080078.2-201ENST00000603766 501 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AL160237.3-201ENST00000604114 1013 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AL353600.1-201ENST00000608148 251 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.15□□□□□ -1.1
RXRBP28702 AC087565.3-203ENST00000641018 837 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
RXRBP28702 AC015871.4-201ENST00000624650 2260 ntBASIC8.15□□□□□ -1.1
RXRBP28702 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.15□□□□□ -1.11
RXRBP28702 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.15□□□□□ -1.11
RXRBP28702 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RXRBP28702 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
RXRBP28702 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RXRBP28702 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RXRBP28702 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 RN7SKP149-201ENST00000363008 344 ntBASIC8.14□□□□□ -1.11
RXRBP28702 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 RNU6-192P-201ENST00000391253 100 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AL358178.1-201ENST00000407698 397 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 RPL22P18-201ENST00000417197 377 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC8.14□□□□□ -1.11
RXRBP28702 AC013262.1-201ENST00000426710 252 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.14□□□□□ -1.11
RXRBP28702 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC8.14□□□□□ -1.11
RXRBP28702 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
RXRBP28702 AURKAPS1-201ENST00000451805 1212 ntBASIC8.14□□□□□ -1.11
RXRBP28702 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 RPS4XP1-201ENST00000482189 787 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 RN7SL346P-201ENST00000491561 294 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC072052.1-201ENST00000496556 306 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC069306.1-201ENST00000507006 843 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC8.14□□□□□ -1.11
RXRBP28702 AC010343.2-201ENST00000510162 224 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC110775.1-201ENST00000513721 462 ntBASIC8.14□□□□□ -1.11
RXRBP28702 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 MRPS36P3-201ENST00000519284 130 ntBASIC8.14□□□□□ -1.11
RXRBP28702 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 IGBP1P1-201ENST00000554337 1009 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC8.14□□□□□ -1.11
RXRBP28702 WT1-AS_8.1-201ENST00000615200 275 ntBASIC8.14□□□□□ -1.11
RXRBP28702 MIR7159-201ENST00000620587 66 ntBASIC8.14□□□□□ -1.11
RXRBP28702 MRPL57P1-201ENST00000621486 265 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC092608.3-201ENST00000625017 386 ntBASIC8.14□□□□□ -1.11
RXRBP28702 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.14□□□□□ -1.11
RXRBP28702 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 AC093278.2-201ENST00000564956 2485 ntBASIC8.14□□□□□ -1.11
RXRBP28702 AC016583.1-201ENST00000624221 2431 ntBASIC8.14□□□□□ -1.11
RXRBP28702 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RXRBP28702 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.14□□□□□ -1.11
RXRBP28702 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 AC009948.5-201ENST00000624360 4406 ntBASIC8.14□□□□□ -1.11
RXRBP28702 GNL2P1-201ENST00000451274 2190 ntBASIC8.14□□□□□ -1.11
RXRBP28702 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.14□□□□□ -1.11
RXRBP28702 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RXRBP28702 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.13□□□□□ -1.11
RXRBP28702 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RXRBP28702 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RXRBP28702 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RXRBP28702 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RXRBP28702 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.13□□□□□ -1.11
RXRBP28702 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RXRBP28702 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RXRBP28702 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RXRBP28702 U8.4-201ENST00000363626 134 ntBASIC8.13□□□□□ -1.11
RXRBP28702 RN7SKP128-201ENST00000364270 303 ntBASIC8.13□□□□□ -1.11
RXRBP28702 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RXRBP28702 AL356057.1-202ENST00000402263 756 ntBASIC8.13□□□□□ -1.11
RXRBP28702 MTATP6P20-201ENST00000414147 562 ntBASIC8.13□□□□□ -1.11
RXRBP28702 HYALP1-201ENST00000417674 1279 ntBASIC8.13□□□□□ -1.11
RXRBP28702 SLC35E1P1-201ENST00000419313 864 ntBASIC8.13□□□□□ -1.11
RXRBP28702 MTND4LP11-201ENST00000422184 280 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms