Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
CFTRP13569 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
CFTRP13569 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 AC092570.3-201ENST00000420113 693 ntBASIC9.28□□□□□ -0.92
CFTRP13569 C4BPAP2-201ENST00000428434 478 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.28□□□□□ -0.92
CFTRP13569 KNOP1P3-201ENST00000446933 426 ntBASIC9.28□□□□□ -0.92
CFTRP13569 NDUFA5P8-201ENST00000449019 346 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC9.28□□□□□ -0.92
CFTRP13569 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9.28□□□□□ -0.92
CFTRP13569 RN7SL356P-201ENST00000582228 248 ntBASIC9.28□□□□□ -0.92
CFTRP13569 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC9.28□□□□□ -0.92
CFTRP13569 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CFTRP13569 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
CFTRP13569 RNA5-8SP5-201ENST00000365304 152 ntBASIC9.28□□□□□ -0.92
CFTRP13569 RPL7P56-201ENST00000429441 717 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.28□□□□□ -0.92
CFTRP13569 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.28□□□□□ -0.92
CFTRP13569 TMEM183AP1-205ENST00000432739 290 ntBASIC9.28□□□□□ -0.92
CFTRP13569 RPL36AP15-201ENST00000444514 266 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AC073264.2-201ENST00000448886 166 ntBASIC9.28□□□□□ -0.92
CFTRP13569 RN7SL385P-201ENST00000468873 276 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AP000797.2-201ENST00000475768 606 ntBASIC9.28□□□□□ -0.92
CFTRP13569 STRADBP1-201ENST00000478954 1281 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AC024451.1-201ENST00000508013 779 ntBASIC9.28□□□□□ -0.92
CFTRP13569 OR5AN2P-201ENST00000534535 896 ntBASIC9.28□□□□□ -0.92
CFTRP13569 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC9.28□□□□□ -0.92
CFTRP13569 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC9.28□□□□□ -0.92
CFTRP13569 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CFTRP13569 AP000769.2-201ENST00000602344 396 ntBASIC9.28□□□□□ -0.92
CFTRP13569 NAA60-237ENST00000615865 326 ntTSL 5 BASIC9.28□□□□□ -0.92
CFTRP13569 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC9.28□□□□□ -0.92
CFTRP13569 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.28□□□□□ -0.92
CFTRP13569 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.27□□□□□ -0.92
CFTRP13569 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
CFTRP13569 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.27□□□□□ -0.92
CFTRP13569 AL031651.1-201ENST00000615357 1438 ntBASIC9.27□□□□□ -0.92
CFTRP13569 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
CFTRP13569 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CFTRP13569 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CFTRP13569 AC007996.1-201ENST00000620414 2821 ntBASIC9.27□□□□□ -0.93
CFTRP13569 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
CFTRP13569 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CFTRP13569 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 IRF5P1-201ENST00000504852 2164 ntBASIC9.27□□□□□ -0.93
CFTRP13569 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CFTRP13569 CRIP1P1-201ENST00000427567 185 ntBASIC9.27□□□□□ -0.93
CFTRP13569 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC9.27□□□□□ -0.93
CFTRP13569 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.27□□□□□ -0.93
CFTRP13569 AC137627.1-201ENST00000545761 289 ntBASIC9.27□□□□□ -0.93
CFTRP13569 AL031320.1-201ENST00000604177 357 ntBASIC9.27□□□□□ -0.93
CFTRP13569 AC104687.2-201ENST00000604442 342 ntBASIC9.27□□□□□ -0.93
CFTRP13569 AC009597.2-201ENST00000604659 592 ntBASIC9.27□□□□□ -0.93
CFTRP13569 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.27□□□□□ -0.93
CFTRP13569 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
CFTRP13569 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.27□□□□□ -0.93
CFTRP13569 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CFTRP13569 AL356317.1-201ENST00000396110 1436 ntBASIC9.27□□□□□ -0.93
CFTRP13569 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CFTRP13569 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC9.26□□□□□ -0.93
CFTRP13569 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 PABPC1P8-201ENST00000452851 2086 ntBASIC9.26□□□□□ -0.93
CFTRP13569 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
CFTRP13569 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
CFTRP13569 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.26□□□□□ -0.93
CFTRP13569 AL121886.1-201ENST00000358609 435 ntBASIC9.26□□□□□ -0.93
CFTRP13569 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CFTRP13569 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.26□□□□□ -0.93
CFTRP13569 NXF4-202ENST00000416098 1465 ntBASIC9.26□□□□□ -0.93
CFTRP13569 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC9.26□□□□□ -0.93
CFTRP13569 RSU1P1-201ENST00000453416 441 ntBASIC9.26□□□□□ -0.93
CFTRP13569 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.26□□□□□ -0.93
CFTRP13569 GTF2F2P1-201ENST00000511083 675 ntBASIC9.26□□□□□ -0.93
CFTRP13569 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.26□□□□□ -0.93
CFTRP13569 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.26□□□□□ -0.93
CFTRP13569 UBE2FP2-201ENST00000566646 462 ntBASIC9.26□□□□□ -0.93
CFTRP13569 MIR4270-201ENST00000581799 70 ntBASIC9.26□□□□□ -0.93
CFTRP13569 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC9.26□□□□□ -0.93
CFTRP13569 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms