Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CARSP2-201ENST00000520688 277 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 MIR4800-201ENST00000537353 80 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC023813.2-201ENST00000564321 469 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AL354943.1-201ENST00000572103 781 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC025175.1-201ENST00000606482 759 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 MRPL57P3-201ENST00000619218 176 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC006328.2-201ENST00000623198 397 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC012005.2-201ENST00000624333 397 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AL132640.3-201ENST00000630473 177 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC105749.1-201ENST00000631338 2008 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AL512353.3-201ENST00000417517 1326 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 DDX18P5-201ENST00000534547 1306 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL6A2P12110 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL6A2P12110 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL6A2P12110 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 OR11H13P-201ENST00000359695 979 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 RNU6-623P-201ENST00000363143 105 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC003989.1-201ENST00000434569 565 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 AL138787.1-202ENST00000437804 898 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 RPS19P6-201ENST00000441327 433 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 HSFY3P-201ENST00000444242 1191 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 RPL34P26-201ENST00000445636 354 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.49□□□□□ -1.37
COL6A2P12110 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 SNX18P26-201ENST00000458433 740 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 MTND4LP3-201ENST00000468320 276 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 RPL9P15-201ENST00000491096 532 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 AP005902.2-201ENST00000518393 307 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.49□□□□□ -1.37
COL6A2P12110 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 PPIAP14-201ENST00000577627 496 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AC091133.5-201ENST00000603088 301 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 MTND3P19-201ENST00000603825 345 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AC024589.2-201ENST00000605642 1294 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AL121890.3-201ENST00000618494 516 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms