Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 AC104623.2-202ENST00000623477 4002 ntBASIC6.18□□□□□ -1.42
TPM1P09493 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.18□□□□□ -1.42
TPM1P09493 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.17□□□□□ -1.42
TPM1P09493 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.17□□□□□ -1.42
TPM1P09493 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.17□□□□□ -1.42
TPM1P09493 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TPM1P09493 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 RN7SKP38-201ENST00000410782 309 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM1P09493 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM1P09493 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.17□□□□□ -1.42
TPM1P09493 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 LINC00328-2P-201ENST00000436585 219 ntBASIC6.17□□□□□ -1.42
TPM1P09493 NANOGP9-201ENST00000439890 892 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM1P09493 RN7SL570P-201ENST00000484405 292 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 LDHBP3-201ENST00000514909 822 ntBASIC6.17□□□□□ -1.42
TPM1P09493 RNA5SP96-201ENST00000516041 107 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM1P09493 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM1P09493 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AP003396.4-201ENST00000527574 265 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.17□□□□□ -1.42
TPM1P09493 AC004232.2-201ENST00000574245 821 ntBASIC6.17□□□□□ -1.42
TPM1P09493 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM1P09493 AP005119.1-201ENST00000580956 292 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC245014.3-201ENST00000618589 347 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC103703.1-201ENST00000634783 663 ntBASIC6.17□□□□□ -1.42
TPM1P09493 AC007603.3-201ENST00000636915 979 ntBASIC6.17□□□□□ -1.42
TPM1P09493 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TPM1P09493 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM1P09493 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM1P09493 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.17□□□□□ -1.42
TPM1P09493 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.17□□□□□ -1.42
TPM1P09493 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TPM1P09493 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TPM1P09493 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
TPM1P09493 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TPM1P09493 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TPM1P09493 OR9K1P-201ENST00000326513 941 ntBASIC6.16□□□□□ -1.42
TPM1P09493 MIR551B-201ENST00000384984 96 ntBASIC6.16□□□□□ -1.42
TPM1P09493 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TPM1P09493 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 AL035422.1-201ENST00000414193 397 ntBASIC6.16□□□□□ -1.42
TPM1P09493 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 RIMKLBP2-201ENST00000424737 654 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.16□□□□□ -1.42
TPM1P09493 NDUFB4P8-201ENST00000435351 367 ntBASIC6.16□□□□□ -1.42
TPM1P09493 RPL6P30-201ENST00000443382 862 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AC007383.1-201ENST00000445875 636 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 OR52I1-201ENST00000450052 1050 ntBASIC6.16□□□□□ -1.42
TPM1P09493 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 RN7SL57P-201ENST00000493687 290 ntBASIC6.16□□□□□ -1.42
TPM1P09493 RN7SL362P-201ENST00000494228 267 ntBASIC6.16□□□□□ -1.42
TPM1P09493 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 AC098976.1-201ENST00000513014 541 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.16□□□□□ -1.42
TPM1P09493 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.16□□□□□ -1.42
TPM1P09493 OR5AM1P-201ENST00000532136 1032 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.16□□□□□ -1.42
TPM1P09493 MIR4776-2-201ENST00000580204 80 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 H3F3BP2-201ENST00000583907 357 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM1P09493 AC004801.6-201ENST00000616571 978 ntBASIC6.16□□□□□ -1.42
TPM1P09493 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.16□□□□□ -1.42
TPM1P09493 PCAT14-202ENST00000627127 3935 ntBASIC6.16□□□□□ -1.42
TPM1P09493 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TPM1P09493 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TPM1P09493 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms