Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM3P06753 PMS2P3-207ENST00000529061 717 ntBASIC6.28□□□□□ -1.4
TPM3P06753 AC068993.1-201ENST00000546724 589 ntBASIC6.28□□□□□ -1.4
TPM3P06753 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM3P06753 AC091078.2-201ENST00000557145 559 ntBASIC6.28□□□□□ -1.4
TPM3P06753 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM3P06753 MIR4701-201ENST00000583094 63 ntBASIC6.28□□□□□ -1.4
TPM3P06753 MIR4260-201ENST00000583107 67 ntBASIC6.28□□□□□ -1.4
TPM3P06753 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM3P06753 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM3P06753 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM3P06753 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM3P06753 SAMMSON-213ENST00000641336 1521 ntBASIC6.28□□□□□ -1.4
TPM3P06753 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM3P06753 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM3P06753 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TPM3P06753 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM3P06753 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TPM3P06753 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.27□□□□□ -1.4
TPM3P06753 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.27□□□□□ -1.4
TPM3P06753 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.4
TPM3P06753 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.4
TPM3P06753 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM3P06753 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
TPM3P06753 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM3P06753 RNA5SP110-201ENST00000362638 115 ntBASIC6.27□□□□□ -1.41
TPM3P06753 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TPM3P06753 MIR130A-201ENST00000385274 89 ntBASIC6.27□□□□□ -1.41
TPM3P06753 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM3P06753 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM3P06753 AL133260.1-201ENST00000405720 405 ntBASIC6.27□□□□□ -1.41
TPM3P06753 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM3P06753 RNA5SP198-201ENST00000410376 127 ntBASIC6.27□□□□□ -1.41
TPM3P06753 RNA5SP296-201ENST00000410523 111 ntBASIC6.27□□□□□ -1.41
TPM3P06753 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM3P06753 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.27□□□□□ -1.41
TPM3P06753 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM3P06753 AC113412.1-201ENST00000425840 504 ntBASIC6.27□□□□□ -1.41
TPM3P06753 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM3P06753 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM3P06753 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TPM3P06753 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM3P06753 PPIAP32-201ENST00000449940 472 ntBASIC6.27□□□□□ -1.41
TPM3P06753 PRPF38AP1-201ENST00000451976 933 ntBASIC6.27□□□□□ -1.41
TPM3P06753 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM3P06753 RPS7P10-201ENST00000464254 603 ntBASIC6.27□□□□□ -1.41
TPM3P06753 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.27□□□□□ -1.41
TPM3P06753 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.27□□□□□ -1.41
TPM3P06753 HMGN1P16-201ENST00000508308 283 ntBASIC6.27□□□□□ -1.41
TPM3P06753 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM3P06753 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM3P06753 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM3P06753 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.27□□□□□ -1.41
TPM3P06753 AGGF1P7-201ENST00000562369 913 ntBASIC6.27□□□□□ -1.41
TPM3P06753 MTCYBP13-201ENST00000578634 1093 ntBASIC6.27□□□□□ -1.41
TPM3P06753 RN7SL66P-201ENST00000582099 264 ntBASIC6.27□□□□□ -1.41
TPM3P06753 MIR3936-201ENST00000584304 110 ntBASIC6.27□□□□□ -1.41
TPM3P06753 WBP1LP11-201ENST00000586141 328 ntBASIC6.27□□□□□ -1.41
TPM3P06753 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM3P06753 AL512413.1-201ENST00000606489 382 ntBASIC6.27□□□□□ -1.41
TPM3P06753 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.27□□□□□ -1.41
TPM3P06753 AC090607.5-201ENST00000615692 224 ntBASIC6.27□□□□□ -1.41
TPM3P06753 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM3P06753 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 TRIM51GP-201ENST00000534741 1350 ntBASIC6.27□□□□□ -1.41
TPM3P06753 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM3P06753 PCAT14-202ENST00000627127 3935 ntBASIC6.27□□□□□ -1.41
TPM3P06753 AC027088.4-201ENST00000611559 1947 ntBASIC6.27□□□□□ -1.41
TPM3P06753 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TPM3P06753 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM3P06753 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM3P06753 LYARP1-201ENST00000436977 1501 ntBASIC6.26□□□□□ -1.41
TPM3P06753 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TPM3P06753 AC104964.3-201ENST00000606115 2860 ntBASIC6.26□□□□□ -1.41
TPM3P06753 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM3P06753 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TPM3P06753 RNA5SP326-201ENST00000363209 110 ntBASIC6.26□□□□□ -1.41
TPM3P06753 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM3P06753 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.26□□□□□ -1.41
TPM3P06753 AC023141.3-201ENST00000436698 278 ntBASIC6.26□□□□□ -1.41
TPM3P06753 IGBP1P3-201ENST00000447449 1000 ntBASIC6.26□□□□□ -1.41
TPM3P06753 UBFD1P1-201ENST00000473259 814 ntBASIC6.26□□□□□ -1.41
TPM3P06753 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
TPM3P06753 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.26□□□□□ -1.41
TPM3P06753 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM3P06753 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM3P06753 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM3P06753 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM3P06753 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM3P06753 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM3P06753 AL390334.1-201ENST00000556395 450 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms