Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 OR7E122P-202ENST00000641144 6171 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
APOBP04114 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 ST13P16-201ENST00000401760 781 ntBASIC3.31□□□□□ -1.88
APOBP04114 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBP04114 AL590399.4-201ENST00000436561 601 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC011005.3-201ENST00000491624 395 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 AC009597.2-201ENST00000604659 592 ntBASIC3.31□□□□□ -1.88
APOBP04114 AP001885.1-201ENST00000621658 558 ntBASIC3.31□□□□□ -1.88
APOBP04114 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
APOBP04114 AC008171.1-201ENST00000395058 200 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC007568.1-201ENST00000422912 471 ntBASIC3.31□□□□□ -1.88
APOBP04114 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 OSTCP1-201ENST00000455507 450 ntBASIC3.31□□□□□ -1.88
APOBP04114 snoU13.22-201ENST00000459428 104 ntBASIC3.31□□□□□ -1.88
APOBP04114 RPS7P6-201ENST00000485777 579 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC140172.1-201ENST00000502928 141 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBP04114 AC034105.4-201ENST00000568304 277 ntBASIC3.31□□□□□ -1.88
APOBP04114 RN7SL356P-201ENST00000582228 248 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 SPATA31D5P-201ENST00000376459 4784 ntBASIC3.31□□□□□ -1.88
APOBP04114 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 AC104118.1-201ENST00000607625 1589 ntBASIC3.31□□□□□ -1.88
APOBP04114 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
APOBP04114 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBP04114 AL592293.2-201ENST00000422292 996 ntBASIC3.31□□□□□ -1.88
APOBP04114 RBMY2TP-201ENST00000451162 947 ntBASIC3.31□□□□□ -1.88
APOBP04114 AP000797.2-201ENST00000475768 606 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 IGHVIII-47-1-201ENST00000518187 331 ntBASIC3.31□□□□□ -1.88
APOBP04114 AP001880.2-201ENST00000538233 448 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBP04114 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
APOBP04114 AC010928.1-201ENST00000592477 1447 ntBASIC3.31□□□□□ -1.88
APOBP04114 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
APOBP04114 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 RNA5SP332-201ENST00000391063 115 ntBASIC3.31□□□□□ -1.88
APOBP04114 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBP04114 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBP04114 IGKV2D-10-201ENST00000520194 281 ntBASIC3.31□□□□□ -1.88
APOBP04114 PARP1P2-201ENST00000556806 195 ntBASIC3.31□□□□□ -1.88
APOBP04114 MIR3667-201ENST00000581025 74 ntBASIC3.31□□□□□ -1.88
APOBP04114 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBP04114 AL513327.3-201ENST00000602618 469 ntBASIC3.31□□□□□ -1.88
APOBP04114 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.31□□□□□ -1.88
APOBP04114 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBP04114 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 BRD7P6-201ENST00000431406 1860 ntBASIC3.3□□□□□ -1.88
APOBP04114 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 RNA5SP191-201ENST00000362585 102 ntBASIC3.3□□□□□ -1.88
APOBP04114 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.3□□□□□ -1.88
APOBP04114 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
APOBP04114 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBP04114 TXNP5-201ENST00000441043 315 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms