Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.98□□□□□ -1.45
APOEP02649 RN7SL284P-201ENST00000498823 275 ntBASIC5.98□□□□□ -1.45
APOEP02649 AC109481.1-201ENST00000509173 282 ntBASIC5.98□□□□□ -1.45
APOEP02649 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.98□□□□□ -1.45
APOEP02649 IGBP1P1-201ENST00000554337 1009 ntBASIC5.98□□□□□ -1.45
APOEP02649 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.98□□□□□ -1.45
APOEP02649 AL133481.2-203ENST00000607558 139 ntBASIC5.98□□□□□ -1.45
APOEP02649 AC090607.5-201ENST00000615692 224 ntBASIC5.98□□□□□ -1.45
APOEP02649 AC127024.6-201ENST00000621598 424 ntBASIC5.98□□□□□ -1.45
APOEP02649 MIR193BHG-214ENST00000641765 509 ntBASIC5.98□□□□□ -1.45
APOEP02649 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 AC004076.2-201ENST00000620532 3323 ntBASIC5.98□□□□□ -1.45
APOEP02649 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.98□□□□□ -1.45
APOEP02649 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 AL355488.2-201ENST00000609909 2850 ntBASIC5.97□□□□□ -1.45
APOEP02649 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
APOEP02649 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 AC004158.1-201ENST00000564508 4319 ntBASIC5.97□□□□□ -1.45
APOEP02649 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.97□□□□□ -1.45
APOEP02649 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 SAMM50P1-201ENST00000455403 1399 ntBASIC5.97□□□□□ -1.45
APOEP02649 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
APOEP02649 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 RPL11P3-201ENST00000395256 523 ntBASIC5.97□□□□□ -1.45
APOEP02649 HMGB1P20-201ENST00000402555 677 ntBASIC5.97□□□□□ -1.45
APOEP02649 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.97□□□□□ -1.45
APOEP02649 AL354868.1-201ENST00000417077 482 ntBASIC5.97□□□□□ -1.45
APOEP02649 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.97□□□□□ -1.45
APOEP02649 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.97□□□□□ -1.45
APOEP02649 RPL12P39-201ENST00000455456 496 ntBASIC5.97□□□□□ -1.45
APOEP02649 NXT1P1-201ENST00000458481 316 ntBASIC5.97□□□□□ -1.45
APOEP02649 RPS23P2-201ENST00000463671 415 ntBASIC5.97□□□□□ -1.45
APOEP02649 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.97□□□□□ -1.45
APOEP02649 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 AC097486.1-201ENST00000515331 210 ntBASIC5.97□□□□□ -1.45
APOEP02649 AC139365.2-201ENST00000517972 253 ntBASIC5.97□□□□□ -1.45
APOEP02649 AC112191.2-201ENST00000522428 333 ntBASIC5.97□□□□□ -1.45
APOEP02649 HMGB1P42-201ENST00000532126 553 ntBASIC5.97□□□□□ -1.45
APOEP02649 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.97□□□□□ -1.45
APOEP02649 OOSP1P2-201ENST00000579644 351 ntBASIC5.97□□□□□ -1.45
APOEP02649 AL513327.3-201ENST00000602618 469 ntBASIC5.97□□□□□ -1.45
APOEP02649 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.97□□□□□ -1.45
APOEP02649 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 AC026124.2-201ENST00000621847 656 ntBASIC5.97□□□□□ -1.45
APOEP02649 AL390318.1-201ENST00000624564 687 ntBASIC5.97□□□□□ -1.45
APOEP02649 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.97□□□□□ -1.45
APOEP02649 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.97□□□□□ -1.45
APOEP02649 OR13C1P-202ENST00000641378 2919 ntBASIC5.97□□□□□ -1.45
APOEP02649 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
APOEP02649 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
APOEP02649 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.96□□□□□ -1.45
APOEP02649 AL031595.2-201ENST00000624215 19071 ntBASIC5.96□□□□□ -1.45
APOEP02649 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
APOEP02649 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
APOEP02649 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
APOEP02649 TMSB4XP4-201ENST00000323496 618 ntBASIC5.96□□□□□ -1.46
APOEP02649 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
APOEP02649 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
APOEP02649 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
APOEP02649 SDHDP6-201ENST00000414693 480 ntBASIC5.96□□□□□ -1.46
APOEP02649 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.96□□□□□ -1.46
APOEP02649 NIFKP3-201ENST00000417799 865 ntBASIC5.96□□□□□ -1.46
APOEP02649 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
APOEP02649 MGAT2P2-201ENST00000427194 797 ntBASIC5.96□□□□□ -1.46
APOEP02649 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.96□□□□□ -1.46
APOEP02649 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.96□□□□□ -1.46
APOEP02649 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 RPL36AP39-201ENST00000445859 318 ntBASIC5.96□□□□□ -1.46
APOEP02649 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.96□□□□□ -1.46
APOEP02649 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 AC016724.1-201ENST00000453215 421 ntBASIC5.96□□□□□ -1.46
APOEP02649 RPS23P6-201ENST00000466136 431 ntBASIC5.96□□□□□ -1.46
APOEP02649 RPSAP37-201ENST00000470913 821 ntBASIC5.96□□□□□ -1.46
APOEP02649 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 PPIAP19-201ENST00000486414 492 ntBASIC5.96□□□□□ -1.46
APOEP02649 NPM1P28-201ENST00000492269 840 ntBASIC5.96□□□□□ -1.46
APOEP02649 AC009120.1-201ENST00000493458 473 ntBASIC5.96□□□□□ -1.46
APOEP02649 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 AC021678.3-201ENST00000517893 476 ntBASIC5.96□□□□□ -1.46
APOEP02649 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.96□□□□□ -1.46
APOEP02649 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms