Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 AL136984.1-201ENST00000607611 1893 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AC114774.1-201ENST00000507410 1770 ntBASIC5.72□□□□□ -1.49
LDLRP01130 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.72□□□□□ -1.49
LDLRP01130 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LDLRP01130 AC016583.1-201ENST00000624221 2431 ntBASIC5.72□□□□□ -1.49
LDLRP01130 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.71□□□□□ -1.49
LDLRP01130 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LDLRP01130 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LDLRP01130 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
LDLRP01130 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
LDLRP01130 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.71□□□□□ -1.49
LDLRP01130 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 AC018717.1-201ENST00000457712 1505 ntBASIC5.71□□□□□ -1.5
LDLRP01130 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LDLRP01130 RN7SKP186-201ENST00000365371 303 ntBASIC5.71□□□□□ -1.5
LDLRP01130 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 METTL15P3-201ENST00000415522 1221 ntBASIC5.71□□□□□ -1.5
LDLRP01130 PTCD2P2-201ENST00000415579 1095 ntBASIC5.71□□□□□ -1.5
LDLRP01130 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 TUBB4BP6-201ENST00000437576 479 ntBASIC5.71□□□□□ -1.5
LDLRP01130 CUBNP2-201ENST00000443534 1139 ntBASIC5.71□□□□□ -1.5
LDLRP01130 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.71□□□□□ -1.5
LDLRP01130 RPL23AP60-201ENST00000450011 454 ntBASIC5.71□□□□□ -1.5
LDLRP01130 OR6C72P-201ENST00000451403 892 ntBASIC5.71□□□□□ -1.5
LDLRP01130 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 ACA64.1-201ENST00000459171 127 ntBASIC5.71□□□□□ -1.5
LDLRP01130 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 AC138409.2-202ENST00000507274 458 ntBASIC5.71□□□□□ -1.5
LDLRP01130 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.71□□□□□ -1.5
LDLRP01130 SNORA26.10-201ENST00000516427 141 ntBASIC5.71□□□□□ -1.5
LDLRP01130 RN7SKP238-201ENST00000516483 249 ntBASIC5.71□□□□□ -1.5
LDLRP01130 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.71□□□□□ -1.5
LDLRP01130 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.71□□□□□ -1.5
LDLRP01130 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 RNU4ATAC-201ENST00000580972 127 ntBASIC5.71□□□□□ -1.5
LDLRP01130 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 AC096586.2-201ENST00000610260 441 ntBASIC5.71□□□□□ -1.5
LDLRP01130 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.71□□□□□ -1.5
LDLRP01130 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 AC083837.1-201ENST00000565297 2994 ntBASIC5.71□□□□□ -1.5
LDLRP01130 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LDLRP01130 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LDLRP01130 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
LDLRP01130 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.71□□□□□ -1.5
LDLRP01130 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.7□□□□□ -1.5
LDLRP01130 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.7□□□□□ -1.5
LDLRP01130 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LDLRP01130 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.7□□□□□ -1.5
LDLRP01130 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LDLRP01130 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LDLRP01130 AL589826.1-201ENST00000340697 249 ntBASIC5.7□□□□□ -1.5
LDLRP01130 MIR133A2-201ENST00000347538 102 ntBASIC5.7□□□□□ -1.5
LDLRP01130 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LDLRP01130 RN7SKP292-201ENST00000365522 317 ntBASIC5.7□□□□□ -1.5
LDLRP01130 AL136116.2-201ENST00000404020 785 ntBASIC5.7□□□□□ -1.5
LDLRP01130 AL158827.1-201ENST00000416300 391 ntBASIC5.7□□□□□ -1.5
LDLRP01130 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.7□□□□□ -1.5
LDLRP01130 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.7□□□□□ -1.5
LDLRP01130 AL121776.1-201ENST00000429337 372 ntBASIC5.7□□□□□ -1.5
LDLRP01130 AC112492.2-201ENST00000432774 1030 ntBASIC5.7□□□□□ -1.5
LDLRP01130 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LDLRP01130 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LDLRP01130 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LDLRP01130 HMGN1P36-201ENST00000446623 298 ntBASIC5.7□□□□□ -1.5
LDLRP01130 AC011476.1-201ENST00000466725 307 ntBASIC5.7□□□□□ -1.5
LDLRP01130 RPL23AP40-201ENST00000487630 390 ntBASIC5.7□□□□□ -1.5
LDLRP01130 KHDC1P1-201ENST00000511053 508 ntBASIC5.7□□□□□ -1.5
LDLRP01130 AC090958.1-201ENST00000511122 351 ntBASIC5.7□□□□□ -1.5
LDLRP01130 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LDLRP01130 ACTR6P1-201ENST00000514311 1104 ntBASIC5.7□□□□□ -1.5
LDLRP01130 IGHV4-55-201ENST00000520889 368 ntBASIC5.7□□□□□ -1.5
LDLRP01130 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LDLRP01130 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.7□□□□□ -1.5
LDLRP01130 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.7□□□□□ -1.5
LDLRP01130 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms