Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-2O95096 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-2O95096 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.47□□□□□ -1.53
NKX2-2O95096 AL163952.1-202ENST00000569625 600 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 TXNP4-201ENST00000575018 310 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 MTCO2P22-201ENST00000603246 681 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 AC135178.6-201ENST00000605314 398 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 AL096803.3-201ENST00000609032 532 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 AC108673.3-201ENST00000609183 335 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 AL139099.4-201ENST00000614802 114 ntBASIC5.47□□□□□ -1.53
NKX2-2O95096 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-2O95096 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-2O95096 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-2O95096 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NKX2-2O95096 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX2-2O95096 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-2O95096 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-2O95096 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.46□□□□□ -1.53
NKX2-2O95096 CDC27P2-201ENST00000425026 1922 ntBASIC5.46□□□□□ -1.53
NKX2-2O95096 AC130360.2-201ENST00000533477 1556 ntBASIC5.46□□□□□ -1.53
NKX2-2O95096 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
NKX2-2O95096 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-2O95096 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
NKX2-2O95096 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.46□□□□□ -1.53
NKX2-2O95096 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-2O95096 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX2-2O95096 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AL591135.1-201ENST00000401578 5914 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NKX2-2O95096 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NKX2-2O95096 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX2-2O95096 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NKX2-2O95096 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 MORF4L1P7-201ENST00000426038 703 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 VN1R110P-201ENST00000438988 971 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 AMYP1-201ENST00000440059 1023 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX2-2O95096 RSU1P1-201ENST00000453416 441 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.46□□□□□ -1.54
NKX2-2O95096 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 RNA5SP340-201ENST00000517132 107 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-2O95096 CYCSP38-201ENST00000559840 322 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 GARSP1-201ENST00000570895 719 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 MTCO3P22-201ENST00000603219 784 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 MIR7109-201ENST00000613748 65 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AL445493.3-201ENST00000619568 477 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-2O95096 AC073592.6-201ENST00000624271 415 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 OR5AC4P-202ENST00000642086 985 ntBASIC5.46□□□□□ -1.54
NKX2-2O95096 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-2O95096 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NKX2-2O95096 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 AF287957.1-201ENST00000607368 1595 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms