Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SNORA58-201ENST00000505219 137 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC010460.2-201ENST00000509054 677 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 UBTFL9-201ENST00000534504 1148 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC007225.2-201ENST00000562529 256 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 COX6CP7-201ENST00000597056 208 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC096947.1-201ENST00000603233 470 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC027449.1-201ENST00000608890 407 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC015922.4-201ENST00000612568 690 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC022467.1-201ENST00000614738 749 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AL356118.1-201ENST00000635272 1078 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 TTC41P-205ENST00000551270 3963 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC106872.5-201ENST00000508856 1416 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 PSG10P-201ENST00000501199 1500 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC011503.2-201ENST00000594230 1500 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 UGT2B27P-201ENST00000505092 1620 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 AC011416.1-201ENST00000514947 1732 ntBASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
CCDC187A0A096LP49 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC005332.9-201ENST00000620266 2921 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL591848.4-201ENST00000567832 3472 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 RNU6-1251P-201ENST00000364502 107 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 MIR143-201ENST00000385300 106 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 MTATP6P31-201ENST00000406985 692 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 BRWD1P3-201ENST00000428816 390 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL121776.1-201ENST00000429337 372 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 PCBP2P1-201ENST00000437262 977 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 RPSAP39-201ENST00000467439 883 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL122020.1-201ENST00000472287 459 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 UBFD1P1-201ENST00000473259 814 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 C1DP5-201ENST00000525775 383 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AP003080.1-202ENST00000526526 915 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AP000648.1-201ENST00000529682 397 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC093014.1-201ENST00000548926 724 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 NOP56P3-201ENST00000549457 385 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC091078.2-201ENST00000557145 559 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL031601.1-201ENST00000605702 394 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL645933.2-201ENST00000606743 1207 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC006924.1-201ENST00000610750 559 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 MIR6809-201ENST00000612189 116 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL137246.2-201ENST00000613439 662 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL512624.1-201ENST00000613638 469 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC004477.3-201ENST00000614061 590 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AL445528.2-201ENST00000620582 470 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms