Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC073111.2-201ENST00000605657 1075 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC108673.3-201ENST00000609183 335 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC005156.1-201ENST00000613371 573 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 CU459211.1-201ENST00000635667 749 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC007842.1-201ENST00000597336 2039 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
CTDP1Q9Y5B0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CTDP1Q9Y5B0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CTDP1Q9Y5B0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 PSG10P-201ENST00000501199 1500 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 BIN2P1-201ENST00000504996 1530 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC106754.1-201ENST00000562632 1513 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC011503.2-201ENST00000594230 1500 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 RNU11-6P-201ENST00000391127 133 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 EEF1B2P8-201ENST00000414101 671 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 HMGB3P5-201ENST00000428894 612 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 TUBB4BP6-201ENST00000437576 479 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC083795.1-201ENST00000491760 320 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC114781.3-201ENST00000512083 142 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 MTATP6P1-201ENST00000514057 681 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 SCARNA18.1-201ENST00000516330 83 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 RNA5SP438-201ENST00000516561 112 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 OR56A7P-201ENST00000524865 941 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC068305.2-201ENST00000550567 1205 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AL121579.2-201ENST00000555466 590 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC079148.1-201ENST00000565944 819 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 MIR6729-201ENST00000618194 65 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AL445493.3-201ENST00000619568 477 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 MIR4302-201ENST00000638058 60 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 OR7A1P-202ENST00000641542 1158 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC005618.1-201ENST00000606901 3148 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.08□□□□□ -1.28
CTDP1Q9Y5B0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AL731532.1-201ENST00000623972 4236 ntBASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 RNFT1P3-201ENST00000340898 1052 ntBASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AL096829.1-201ENST00000413677 457 ntBASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AC245884.2-201ENST00000426257 404 ntBASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AC097721.1-201ENST00000427150 1253 ntBASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 CETN4P-201ENST00000432407 469 ntBASIC7.07□□□□□ -1.28
CTDP1Q9Y5B0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms