Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RN7SKP161-201ENST00000411110 305 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 TCEA1P4-201ENST00000415066 844 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 RPL36P1-201ENST00000419720 225 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 RPL7P30-201ENST00000420888 709 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 OR6K4P-201ENST00000423179 955 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC099782.1-201ENST00000425889 474 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 ETF1P3-201ENST00000430422 1160 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 CDY14P-201ENST00000431260 1014 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AL050341.1-201ENST00000447743 313 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 CDY23P-201ENST00000451661 1014 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC005017.1-201ENST00000482002 490 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 SCARNA6-201ENST00000515982 265 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 Y_RNA.702-201ENST00000516843 96 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AP000435.1-201ENST00000528539 496 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 LINC00556-201ENST00000569603 412 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC025594.3-201ENST00000613068 790 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AL121809.2-201ENST00000613169 341 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC022509.4-201ENST00000621404 572 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC063952.1-203ENST00000634410 658 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC000367.1-201ENST00000452711 1766 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC016930.1-201ENST00000468766 2205 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AP003972.1-201ENST00000625192 5446 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AP003486.1-201ENST00000525716 3994 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC068860.1-201ENST00000623701 3736 ntBASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
ZC3H4Q9UPT8 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
ZC3H4Q9UPT8 AL359396.1-201ENST00000623151 2376 ntBASIC8.59□□□□□ -1.04
ZC3H4Q9UPT8 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.04
ZC3H4Q9UPT8 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 SNORA70G-201ENST00000383923 142 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 RPL36AP33-201ENST00000450395 310 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 SNORA81.1-201ENST00000458922 177 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 RPL7P18-201ENST00000478965 734 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 OR5H5P-201ENST00000503164 928 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC112484.3-201ENST00000505910 329 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 HMGN1P16-201ENST00000508308 283 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AP001646.1-201ENST00000527936 915 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 MED28P5-201ENST00000528254 438 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 OR4A21P-201ENST00000532759 944 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC005519.1-201ENST00000554490 601 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 NPM1P47-201ENST00000560843 856 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 IMMP1LP1-201ENST00000605170 488 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC090517.2-201ENST00000614966 680 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AL121873.1-201ENST00000616013 524 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms