Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 OR13C1P-202ENST00000641378 2919 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC027279.4-201ENST00000624371 2072 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC093155.2-201ENST00000420734 937 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 GAPDHP48-201ENST00000436626 961 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC138409.2-202ENST00000507274 458 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 RNA5SP362-201ENST00000516048 118 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AP001267.4-201ENST00000602598 545 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 MIPEPP2-201ENST00000422560 1819 ntBASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NPIPA1Q9UND3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 RNA5SP500-201ENST00000364486 119 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 MIR143-201ENST00000385300 106 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 HMGB1P20-201ENST00000402555 677 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 MRPL53P1-201ENST00000414323 319 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AK4P4-201ENST00000419465 646 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC099677.3-201ENST00000427081 395 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC002504.1-201ENST00000438281 691 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC079080.1-201ENST00000479841 822 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 RN7SL629P-201ENST00000489622 285 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 OR2A3P-201ENST00000493774 953 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 NENFP3-201ENST00000503735 313 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 ATP5LP3-201ENST00000514223 304 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 HMGN2P36-201ENST00000529541 409 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC090022.1-201ENST00000546569 311 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 MIR4505-201ENST00000582238 73 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AL354950.1-201ENST00000614150 568 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AL691477.1-201ENST00000624398 162 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC087565.3-203ENST00000641018 837 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.35□□□□□ -1.55
NPIPA1Q9UND3 AC116158.1-201ENST00000560231 2129 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms