Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AL159987.1-201ENST00000347911 293 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 OR2AT2P-201ENST00000413438 905 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AL022331.1-201ENST00000429025 477 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC242426.1-201ENST00000435270 960 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 FRG2FP-204ENST00000453982 852 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 MRE11P1-201ENST00000464884 2127 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC138866.2-201ENST00000508650 584 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 RNU6-615P-201ENST00000516065 106 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC007346.2-201ENST00000564816 892 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC005224.3-201ENST00000584683 2140 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 FO393422.1-201ENST00000603908 708 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 MIR6768-201ENST00000610734 72 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AL355974.3-201ENST00000617383 467 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AC093671.1-201ENST00000624981 2929 ntBASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP2Q9UDT6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC005522.1-201ENST00000395416 346 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 DPPA2P2-201ENST00000418220 897 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC117434.1-201ENST00000419971 836 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 Z84478.1-201ENST00000438230 1219 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC005297.1-201ENST00000444765 862 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 RNU1-88P-201ENST00000459274 128 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AL136038.1-201ENST00000497246 351 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 RPL7L1P4-201ENST00000513004 707 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC097486.1-201ENST00000515331 210 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC096996.1-201ENST00000563813 325 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AC109309.2-201ENST00000612597 332 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CLIP2Q9UDT6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AL161912.4-201ENST00000623889 2468 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 SRRM1P3-201ENST00000426911 2678 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 RNA5SP453-201ENST00000362503 119 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 U3.25-201ENST00000391209 220 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 BMS1P17-202ENST00000416720 316 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AC019205.1-201ENST00000421830 730 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AL121776.1-201ENST00000429337 372 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 RPL5P2-201ENST00000429598 854 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AC073909.1-201ENST00000447112 999 ntBASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.76□□□□□ -1.33
CLIP2Q9UDT6 OR7E157P-201ENST00000494376 911 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms