Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHD7Q9P2D1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD7Q9P2D1 AC111000.3-201ENST00000508057 576 ntBASIC5.61□□□□□ -1.51
CHD7Q9P2D1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD7Q9P2D1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD7Q9P2D1 AC135068.12-201ENST00000637370 931 ntBASIC5.61□□□□□ -1.51
CHD7Q9P2D1 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD7Q9P2D1 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD7Q9P2D1 AC100871.1-201ENST00000507871 1456 ntBASIC5.61□□□□□ -1.51
CHD7Q9P2D1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC007996.1-201ENST00000620414 2821 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 XIST-206ENST00000434839 2865 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC009480.2-201ENST00000422916 432 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 RPL12P39-201ENST00000455456 496 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 COX6B1P5-201ENST00000509843 249 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC068724.3-201ENST00000625906 87 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 RNA5SP332-201ENST00000391063 115 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC119751.6-201ENST00000416712 186 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 RNA5SP43-201ENST00000516559 110 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC018558.5-201ENST00000565840 952 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 MEMO1P5-201ENST00000604810 406 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 AC114774.1-201ENST00000507410 1770 ntBASIC5.6□□□□□ -1.51
CHD7Q9P2D1 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD7Q9P2D1 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 MIR1182-201ENST00000408363 97 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 OR11H3P-201ENST00000554547 982 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AL359715.3-201ENST00000569267 2123 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC135068.5-201ENST00000624197 983 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 MIR6830-201ENST00000636015 70 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC073869.8-201ENST00000641806 335 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AL049697.2-201ENST00000403708 294 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC007064.3-201ENST00000422608 359 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC058823.1-201ENST00000485315 474 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 SS18L2P2-201ENST00000583960 235 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 AC091932.2-201ENST00000623014 291 ntBASIC5.59□□□□□ -1.51
CHD7Q9P2D1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
CHD7Q9P2D1 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CHD7Q9P2D1 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHD7Q9P2D1 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHD7Q9P2D1 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CHD7Q9P2D1 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHD7Q9P2D1 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHD7Q9P2D1 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 MIR551A-201ENST00000385042 96 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 GAPDHP15-201ENST00000398586 975 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 DNAJC19P7-201ENST00000428811 344 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms