Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AL024507.1-201ENST00000412741 274 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 MTCO1P43-201ENST00000431831 488 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 SOCS5P1-201ENST00000440415 949 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 RPL7P33-201ENST00000444159 742 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 RPL6P5-201ENST00000445678 828 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 CYCSP42-201ENST00000450823 238 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC009963.3-201ENST00000458090 486 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC128716.1-201ENST00000475129 166 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 SNORA58-201ENST00000505219 137 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC095052.1-201ENST00000509955 863 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC106800.3-201ENST00000511389 308 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC010374.2-201ENST00000512933 535 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AP000916.1-201ENST00000533869 835 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AL109741.3-201ENST00000561748 592 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC106730.2-201ENST00000566641 540 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC027334.1-201ENST00000603257 310 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LRFN1Q9P244 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRFN1Q9P244 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LRFN1Q9P244 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRFN1Q9P244 QRSL1P1-201ENST00000400977 1540 ntBASIC5.84□□□□□ -1.48
LRFN1Q9P244 MTCO1P7-201ENST00000419523 1542 ntBASIC5.84□□□□□ -1.48
LRFN1Q9P244 MTCO1P15-201ENST00000529569 1526 ntBASIC5.84□□□□□ -1.48
LRFN1Q9P244 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
LRFN1Q9P244 AC104966.1-201ENST00000467010 1464 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AL136984.1-201ENST00000607611 1893 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 FO082842.1-201ENST00000423552 1370 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 MFSD8-213ENST00000641134 1327 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 RNA5SP350-201ENST00000363298 111 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 RN7SKP28-201ENST00000364770 305 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 RNU6-925P-201ENST00000384629 104 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 RNU6-244P-201ENST00000391028 104 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 RPS27AP11-201ENST00000402798 447 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 RPSAP65-201ENST00000429660 595 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 CYCSP11-201ENST00000436426 315 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 CST12P-201ENST00000457644 362 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC068522.1-201ENST00000482895 345 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 OR4D12P-201ENST00000509361 911 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 IGKV1D-22-201ENST00000518953 324 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 COX6B1P4-201ENST00000519826 484 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AP004609.2-201ENST00000532177 190 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms