Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 MRRFP1-201ENST00000435941 1675 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 RNA5SP30-201ENST00000365552 115 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 TRAV35-201ENST00000390462 330 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 RN7SKP86-201ENST00000410454 332 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 HYALP1-201ENST00000417674 1279 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 RPL12P18-201ENST00000437175 325 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AL161722.1-201ENST00000446972 1032 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC023194.2-201ENST00000465398 406 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 PSAT1P4-201ENST00000466500 526 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 RPS17P15-201ENST00000475609 349 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 NPM1P28-201ENST00000492269 840 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC091912.1-201ENST00000511351 248 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 MRPS5P3-201ENST00000515577 166 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AP003033.2-201ENST00000528901 805 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 TRIM51DP-201ENST00000529746 596 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 BTG1P1-201ENST00000540396 508 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC007956.1-201ENST00000555623 542 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC090286.3-201ENST00000573133 187 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 CCDC58P1-201ENST00000578567 430 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC091167.5-201ENST00000605689 894 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 AC093225.1-201ENST00000506867 1408 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 CASC19-238ENST00000641523 1558 ntBASIC5.29□□□□□ -1.56
VAPAQ9P0L0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VAPAQ9P0L0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC002525.1-201ENST00000624392 1622 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 RPSAP35-201ENST00000413753 818 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 FAM183DP-201ENST00000421987 399 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 RPL7P56-201ENST00000429441 717 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 PPIAP27-201ENST00000453800 265 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC009963.3-201ENST00000458090 486 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC090589.1-201ENST00000473109 362 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms