Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DPPA2P4-201ENST00000563717 878 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 COX6CP7-201ENST00000597056 208 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC005229.3-201ENST00000603438 323 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 HIRAP1-201ENST00000605318 787 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AP005431.1-201ENST00000618479 319 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC015660.5-201ENST00000623238 564 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC138907.8-201ENST00000623981 2256 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 NPM1P10-201ENST00000398310 865 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 OR7E101P-201ENST00000400428 513 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 DSTNP5-201ENST00000427921 523 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 ARL5AP3-201ENST00000439327 386 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL451063.1-201ENST00000450164 1133 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 OR11I1P-201ENST00000486033 954 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 RPL32P33-201ENST00000487023 394 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 DUTP1-201ENST00000493631 470 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 RN7SKP70-201ENST00000516655 271 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 SUMO2P19-201ENST00000518920 295 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 HSPE1P2-201ENST00000554777 306 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC092121.1-201ENST00000569452 202 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 MTND2P13-201ENST00000577438 1039 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC027243.2-201ENST00000602530 724 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL138895.2-201ENST00000603019 178 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AC093388.1-201ENST00000609166 430 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 AL352984.2-202ENST00000613699 155 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 MIR1910-201ENST00000636955 80 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 OR8G3P-202ENST00000641572 1255 ntBASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.42□□□□□ -1.38
BLOC1S4Q9NUP1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 METTL15P3-201ENST00000415522 1221 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC013470.3-201ENST00000420252 1194 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 NPM1P26-201ENST00000426339 738 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC127526.2-201ENST00000426436 775 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 RPS23P6-201ENST00000466136 431 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 NDUFA5P5-201ENST00000468361 342 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 RNA5SP271-201ENST00000516700 88 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 SCARNA6.1-201ENST00000516989 238 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC021678.3-201ENST00000517893 476 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 HNRNPCP1-201ENST00000556181 766 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC079315.1-201ENST00000602952 623 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 479.3 ms