Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 AC003973.3-201ENST00000624863 2822 ntBASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CCM2LQ9NUG4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 ANKRD36P1-201ENST00000344424 659 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MIR513B-201ENST00000385136 84 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 Y_RNA.578-201ENST00000390903 88 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC092638.1-201ENST00000411966 1275 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 HMGB3P31-201ENST00000413333 595 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RPL7AP51-201ENST00000422016 760 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RPL23AP4-201ENST00000427757 463 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 HMGB3P10-201ENST00000434734 572 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 PTGES3P1-201ENST00000439531 483 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MRPL35P2-201ENST00000448009 511 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 OR51B8P-201ENST00000449892 769 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC016724.1-201ENST00000453215 421 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 PTGES3P5-201ENST00000455109 434 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MED28P7-201ENST00000456611 530 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RPL7P32-201ENST00000457119 744 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC002075.1-201ENST00000457396 676 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 PSMC1P13-201ENST00000458195 985 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC079193.1-201ENST00000460497 588 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RPL29P23-201ENST00000486188 442 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AL591122.1-201ENST00000487348 492 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 SNORA81.2-201ENST00000516868 170 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AP001803.1-201ENST00000525668 147 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AP001000.1-201ENST00000526843 742 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC069240.2-201ENST00000550242 609 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC007346.1-201ENST00000569208 867 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RN7SL270P-201ENST00000579643 281 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AP002884.5-201ENST00000595053 1132 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC005377.1-201ENST00000605126 456 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 BX323046.1-201ENST00000610145 535 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 OR8G7P-201ENST00000616658 848 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MIR6778-201ENST00000617912 73 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC096708.4-201ENST00000620563 552 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 CU459211.1-201ENST00000635667 749 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 AC102941.1-201ENST00000567616 1537 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 VN2R3P-201ENST00000422626 1412 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 MAPK10-261ENST00000641050 3109 ntBASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CCM2LQ9NUG4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms