Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL161722.1-201ENST00000446972 1032 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 CEACAMP11-201ENST00000455211 583 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 RN7SL346P-201ENST00000491561 294 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 ZNF519P4-201ENST00000514008 125 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 MIR2117-201ENST00000516780 80 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AP006245.2-201ENST00000522004 300 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 OR56A7P-201ENST00000524865 941 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC137627.1-201ENST00000545761 289 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC233702.9-201ENST00000581528 203 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AP005136.2-201ENST00000583253 1049 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AL356608.1-201ENST00000610034 820 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC012676.3-201ENST00000614983 479 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 MIR6823-201ENST00000622118 61 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AP001962.1-201ENST00000624114 559 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 RBPJP7-201ENST00000442803 1447 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC019072.1-201ENST00000604535 1551 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 RPL35AP31-201ENST00000418340 337 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 Z82198.3-201ENST00000421145 199 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 PCBP2P1-201ENST00000437262 977 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 PRPF38AP1-201ENST00000451976 933 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 RPL12P30-201ENST00000488389 499 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 MAST4-IT1-201ENST00000514241 658 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC079064.1-201ENST00000528365 362 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 MT1CP-201ENST00000567054 174 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 PRPF19P1-201ENST00000584766 898 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC096861.1-201ENST00000616652 240 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 CASC19-248ENST00000641674 1356 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AL034549.2-201ENST00000618285 3373 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.11□□□□□ -1.59
HMG20AQ9NP66 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
HMG20AQ9NP66 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 SNORA21-201ENST00000362423 132 ntBASIC5.1□□□□□ -1.59
HMG20AQ9NP66 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 SNORA48.4-201ENST00000391089 134 ntBASIC5.1□□□□□ -1.59
HMG20AQ9NP66 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 RPL12P12-201ENST00000424633 501 ntBASIC5.1□□□□□ -1.59
HMG20AQ9NP66 AC099782.1-201ENST00000425889 474 ntBASIC5.1□□□□□ -1.59
HMG20AQ9NP66 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.1□□□□□ -1.59
HMG20AQ9NP66 SEPT14P12-201ENST00000442280 560 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms