Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 HCFC2P1-201ENST00000392864 1592 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AL159987.1-201ENST00000347911 293 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AL121886.1-201ENST00000358609 435 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 RNA5SP433-201ENST00000364491 114 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 NPM1P37-201ENST00000403105 874 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AL356968.2-201ENST00000412769 1257 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC009506.2-201ENST00000420635 840 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 PRUNEP1-201ENST00000425846 705 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC244033.1-201ENST00000426826 870 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC110602.1-201ENST00000437414 318 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 RN7SL168P-201ENST00000463821 279 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 RN7SL197P-201ENST00000466981 299 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC009120.1-201ENST00000493458 473 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 RNA5SP473-201ENST00000516402 125 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC060775.1-201ENST00000518241 520 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AC025262.3-201ENST00000623666 360 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 OR8G3P-202ENST00000641572 1255 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 HSPD1P7-201ENST00000447985 1686 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 AL513548.1-201ENST00000562904 1724 ntBASIC5.77□□□□□ -1.49
LRRC40Q9H9A6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC092111.2-201ENST00000611627 1414 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC109446.4-201ENST00000623235 2755 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 RN7SKP275-201ENST00000364626 301 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 OR7E101P-201ENST00000400428 513 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC096921.1-201ENST00000411661 375 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 BX323845.3-201ENST00000428215 527 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 ATP5LP5-201ENST00000483050 299 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 RN7SL649P-201ENST00000496974 275 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 RPS17P5-201ENST00000498293 408 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 NENFP3-201ENST00000503735 313 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 ASNSP4-201ENST00000511103 447 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC068305.2-201ENST00000550567 1205 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 MIR4271-201ENST00000582451 67 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms