Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 AL117339.4-201ENST00000608335 7063 ntBASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNGAP1Q96PV0 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC097634.1-201ENST00000604491 2467 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-796P-201ENST00000391086 107 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 YWHAZP6-201ENST00000399764 738 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC096644.3-201ENST00000416788 338 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AL929472.1-201ENST00000417484 429 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CHEK2P5-201ENST00000423877 246 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 VN1R20P-201ENST00000425215 966 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC115283.1-201ENST00000427353 400 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 NDUFA12P1-201ENST00000455914 406 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AL133477.1-201ENST00000457472 514 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC095057.1-201ENST00000507583 168 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC108475.1-201ENST00000507880 950 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC026898.1-201ENST00000586404 571 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC004805.3-201ENST00000603178 310 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC024257.5-201ENST00000612739 531 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC003992.1-201ENST00000635364 557 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SMG1P5-202ENST00000529428 4219 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SMG1P2-201ENST00000566127 4221 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AL031651.1-201ENST00000615357 1438 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC007993.1-201ENST00000621298 2430 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 MAPK10-365ENST00000641902 3825 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 AC008432.1-201ENST00000615912 1320 ntBASIC7.56□□□□□ -1.2
SYNGAP1Q96PV0 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 Y_RNA.77-201ENST00000362962 107 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms