Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AL589765.6-201ENST00000601909 549 ntBASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AL049829.3-202ENST00000604278 711 ntBASIC4.25□□□□□ -1.73
AP1S3Q96PC3 Z93930.3-201ENST00000607919 749 ntBASIC4.25□□□□□ -1.73
AP1S3Q96PC3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 MIR6849-201ENST00000618543 69 ntBASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AC025574.1-201ENST00000554784 1653 ntBASIC4.25□□□□□ -1.73
AP1S3Q96PC3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 RBMY1HP-201ENST00000382759 1389 ntBASIC4.25□□□□□ -1.73
AP1S3Q96PC3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AP1S3Q96PC3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC092681.1-201ENST00000297369 291 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 RN7SKP78-201ENST00000364711 318 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 RNA5SP85-201ENST00000365378 119 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 MIR138-2-201ENST00000384916 84 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 MIR27A-201ENST00000385073 78 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL078599.1-201ENST00000402075 293 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL139805.1-201ENST00000407837 289 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC108479.1-201ENST00000431142 427 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL445928.1-201ENST00000435545 222 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 SNX18P25-201ENST00000510539 758 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 GAPDHP62-201ENST00000515313 990 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC110056.1-201ENST00000525759 911 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 NPIPB14P-203ENST00000532298 987 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 GARSP1-201ENST00000570895 719 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 RN7SL32P-201ENST00000580514 281 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AP005136.2-201ENST00000583253 1049 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL139099.4-201ENST00000614802 114 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL162574.1-201ENST00000615702 950 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL122125.1-201ENST00000616999 600 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 AC083843.3-201ENST00000623679 2186 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.24□□□□□ -1.73
AP1S3Q96PC3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP1S3Q96PC3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 GNL2P1-201ENST00000451274 2190 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC073136.1-201ENST00000449426 2884 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 SNORA21-201ENST00000362423 132 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms