Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 OR9N1P-202ENST00000494289 481 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 MRPL57P6-201ENST00000506570 309 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 FABP5P6-201ENST00000510588 409 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 MTCO3P27-201ENST00000514397 196 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 CIR1P1-201ENST00000524055 1133 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC084759.1-201ENST00000561168 290 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC004775.1-201ENST00000607389 753 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 OR51C1P-201ENST00000608504 942 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AP000864.1-201ENST00000609424 650 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 CXADRP3-202ENST00000617265 1100 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AL645927.2-201ENST00000618350 349 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC092646.2-201ENST00000431242 2095 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 ZNF402P-201ENST00000404435 3100 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 MIR365B-201ENST00000362317 111 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 RNU1-134P-201ENST00000362935 165 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC007618.1-201ENST00000366455 732 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 RN7SKP17-201ENST00000411242 351 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL024507.1-201ENST00000412741 274 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL035422.1-201ENST00000414193 397 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC099677.3-201ENST00000427081 395 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC064862.5-201ENST00000440618 334 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 Z99127.2-201ENST00000441426 334 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 RPS7P3-201ENST00000443360 580 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 RPL5P10-201ENST00000445207 894 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL451063.1-201ENST00000450164 1133 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 OR7E22P-201ENST00000478335 1035 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC083795.1-201ENST00000491760 320 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 MIR2117-201ENST00000516780 80 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 UBTFL9-201ENST00000534504 1148 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL049838.1-201ENST00000563647 981 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC090826.1-203ENST00000569235 490 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC006946.3-201ENST00000609791 756 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL135999.3-201ENST00000610501 812 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC013437.2-201ENST00000639587 677 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AC099654.15-201ENST00000639802 509 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 RBMY1HP-201ENST00000382759 1389 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 CCAT2-201ENST00000630920 1752 ntBASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms