Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 OR1E3-201ENST00000575608 948 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC026367.3-201ENST00000619032 590 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC073488.3-201ENST00000631611 778 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AL357140.4-201ENST00000636827 412 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 RN7SKP240-201ENST00000410583 375 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC007679.3-201ENST00000434035 414 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 RPL12P18-201ENST00000437175 325 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 RPL5P7-201ENST00000444235 813 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC009963.3-201ENST00000458090 486 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 ATP5LP5-201ENST00000483050 299 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC122688.1-201ENST00000541494 223 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC005632.2-201ENST00000564271 828 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC106730.2-201ENST00000566641 540 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 COX6CP7-201ENST00000597056 208 ntBASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC112Q8NEF3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 ADAM5-202ENST00000399789 1942 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC079097.1-201ENST00000512187 1399 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 MIR323B-201ENST00000385269 82 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC092642.1-201ENST00000392417 425 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC005042.1-201ENST00000393397 800 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC092865.3-201ENST00000425390 1026 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AL445466.1-201ENST00000448432 357 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC144530.1-201ENST00000452862 555 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC094085.1-201ENST00000468914 584 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 NMNAT1P5-201ENST00000559657 841 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 DHFRP1-201ENST00000579682 559 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC005726.4-201ENST00000582858 458 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 RFPL4AP6-201ENST00000616792 846 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 RBPJP7-201ENST00000442803 1447 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 RBPJP5-201ENST00000449433 1447 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms