Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MIR4302-201ENST00000638058 60 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 AC074141.1-201ENST00000588129 2995 ntBASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC33Q8N5R6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC096921.2-201ENST00000561507 1916 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC010132.2-201ENST00000295493 1043 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC023490.2-201ENST00000359859 470 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 SNORA43.1-201ENST00000364863 140 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 RN7SKP69-201ENST00000365390 305 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 MTND2P15-201ENST00000418575 892 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC016908.1-201ENST00000442571 1219 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 DNAJC19P5-201ENST00000443295 316 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 HIGD1AP16-201ENST00000450986 258 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC108751.3-201ENST00000461814 1020 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 RN7SL326P-201ENST00000477493 296 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 NPM1P28-201ENST00000492269 840 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 MTATP6P1-201ENST00000514057 681 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 RNA5SP400-201ENST00000517155 111 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 NOP56P3-201ENST00000549457 385 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 MIR4420-201ENST00000583944 77 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC005242.1-201ENST00000585658 438 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 BNIP3P35-201ENST00000604530 490 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AP000894.4-201ENST00000610185 483 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC245389.2-201ENST00000616023 576 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC242843.1-201ENST00000618702 573 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC018628.1-201ENST00000624147 3819 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC010872.1-201ENST00000624225 675 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 AC129915.3-201ENST00000634128 948 ntBASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC33Q8N5R6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC33Q8N5R6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC33Q8N5R6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC33Q8N5R6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC33Q8N5R6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC33Q8N5R6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC33Q8N5R6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 SNORA63.3-201ENST00000362682 132 ntBASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 RNA5SP375-201ENST00000362975 119 ntBASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 RNU1-49P-201ENST00000363468 159 ntBASIC6.39□□□□□ -1.39
CCDC33Q8N5R6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms