Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC009506.2-201ENST00000420635 840 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 RPL5P2-201ENST00000429598 854 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 TMEM183AP1-205ENST00000432739 290 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 HMGB3P24-201ENST00000433260 622 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 HMGN1P2-201ENST00000445197 310 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 GLUD1P3-202ENST00000508551 200 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC027026.1-201ENST00000532323 742 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC063977.5-201ENST00000601044 974 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC025857.2-201ENST00000602711 238 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC002069.2-201ENST00000603580 883 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AL096712.1-201ENST00000614561 159 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 RN7SL544P-201ENST00000617232 284 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 RN7SL763P-201ENST00000620922 284 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC025470.1-201ENST00000510053 2032 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AL355488.2-201ENST00000609909 2850 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 OR52B3P-201ENST00000314715 928 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 MIR133A2-201ENST00000347538 102 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC023490.2-201ENST00000359859 470 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 MIR375-201ENST00000362103 64 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC096921.1-201ENST00000411661 375 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 OR8Q1P-201ENST00000526467 655 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC015802.2-201ENST00000589690 189 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 AC015712.7-201ENST00000615211 635 ntBASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC65Q8IXS2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC009962.1-201ENST00000567327 3813 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AL121886.1-201ENST00000358609 435 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 RNA5SP30-201ENST00000365552 115 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC005042.1-201ENST00000393397 800 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 HMGN1P20-201ENST00000411849 300 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 RPS6P23-201ENST00000413224 722 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 NENFP1-201ENST00000419476 466 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 RPL5P10-201ENST00000445207 894 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 SNORD125-201ENST00000459538 96 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 RPS3AP15-201ENST00000483874 781 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC097486.1-201ENST00000515331 210 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 HMGB1P42-201ENST00000532126 553 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 NANOGNBP2-201ENST00000544753 553 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC079600.1-201ENST00000550326 297 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms