Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SUMO2P14-201ENST00000604488 293 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SNORD96A-201ENST00000606577 79 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 MIR6889-201ENST00000613185 59 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 MTCO1P25-201ENST00000414449 1799 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC096992.2-201ENST00000609553 1684 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL139384.2-201ENST00000613809 3590 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 PPIAP24-201ENST00000328558 471 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 RNA5SP85-201ENST00000365378 119 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 U3.52-201ENST00000384034 216 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 RNU6-648P-201ENST00000410190 107 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 RN7SKP221-201ENST00000410420 301 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC096537.2-201ENST00000413707 714 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC011233.1-201ENST00000422812 283 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 ELOCP30-201ENST00000447108 299 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC104978.1-201ENST00000449387 391 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OR52I1-201ENST00000450052 1050 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MTCO3P16-201ENST00000454456 754 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 RN7SL836P-201ENST00000476140 296 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 RPL29P23-201ENST00000486188 442 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OR52H2P-201ENST00000514607 902 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC092865.1-201ENST00000544395 1023 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC090888.1-201ENST00000561335 1141 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC092718.4-201ENST00000566639 716 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MRPS21P9-201ENST00000571150 257 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL354943.1-201ENST00000572103 781 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL049840.5-201ENST00000602827 552 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 NDUFB9P1-201ENST00000604683 510 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL583856.2-201ENST00000606298 543 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AL021707.7-201ENST00000607991 416 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC120057.5-201ENST00000623840 154 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC098679.5-201ENST00000624394 571 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MIR1322-201ENST00000638013 71 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC103706.2-201ENST00000638080 240 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 OR8A1-204ENST00000642111 1145 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 AC007382.1-201ENST00000624376 2618 ntBASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms