Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AC091133.5-201ENST00000603088 301 ntBASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AC026367.3-201ENST00000619032 590 ntBASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AL137067.2-201ENST00000621202 131 ntBASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AC007347.2-201ENST00000623044 180 ntBASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 FRG1EP-201ENST00000634469 770 ntBASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AC010329.2-201ENST00000595195 2737 ntBASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.57□□□□□ -1.68
KCNIP4Q6PIL6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 OR9K1P-201ENST00000326513 941 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 SNORA43.1-201ENST00000364863 140 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 ST13P16-201ENST00000401760 781 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 RPL10P10-201ENST00000403509 664 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 RN7SKP205-201ENST00000410999 307 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AL139135.1-201ENST00000412675 209 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 HYALP1-201ENST00000417674 1279 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 OR10T1P-201ENST00000424327 947 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AHCYP8-201ENST00000425108 209 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AP003385.1-201ENST00000426387 893 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 VN1R53P-201ENST00000429536 957 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC114402.2-201ENST00000432760 643 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC046176.1-201ENST00000435260 1170 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC093716.1-201ENST00000435923 377 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 PSMD8P1-201ENST00000436275 769 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 ARL5AP3-201ENST00000439327 386 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AL592114.2-201ENST00000440142 532 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 XKRYP6-201ENST00000440468 1116 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC015983.1-201ENST00000441577 373 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 XKRYP3-201ENST00000442113 1116 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AL591623.2-201ENST00000449978 222 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 NPM1P19-201ENST00000450070 712 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 MED28P7-201ENST00000456611 530 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 TREML3P-201ENST00000457327 501 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC079193.1-201ENST00000460497 588 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC105391.1-201ENST00000503155 1045 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 GAPDHP62-201ENST00000515313 990 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 SNORA70.17-201ENST00000516449 133 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 IGHV3-63-201ENST00000518422 341 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC090424.1-201ENST00000535243 736 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC068993.1-201ENST00000546724 589 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC009729.1-201ENST00000548873 1133 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC087888.1-201ENST00000550884 1254 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC009268.1-201ENST00000561352 1203 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC106730.2-201ENST00000566641 540 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AL355974.3-201ENST00000617383 467 ntBASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms