Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 RPL34P20-201ENST00000442771 351 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC011753.3-201ENST00000443436 406 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC097484.1-201ENST00000471148 389 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 GTF2F2P1-201ENST00000511083 675 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC011447.4-201ENST00000587562 111 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC060766.1-201ENST00000590824 627 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC093799.2-201ENST00000610062 578 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC007686.1-201ENST00000488511 463 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 PDCL3P4-201ENST00000489621 720 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC004980.4-201ENST00000513375 203 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC091905.4-201ENST00000623432 202 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 AC112694.2-201ENST00000623697 768 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AC007114.2-201ENST00000576014 4281 ntBASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AC093162.1-201ENST00000419682 124 ntBASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AC018552.1-201ENST00000562099 811 ntBASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 AP003789.1-201ENST00000617737 605 ntBASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 ZNF812P-201ENST00000457674 1694 ntBASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42BPAQ5VT25 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 RN7SKP103-201ENST00000363848 320 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 RNU1-59P-201ENST00000364829 162 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AL035419.1-201ENST00000397037 564 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AL009179.1-201ENST00000406085 265 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC068138.1-201ENST00000412635 217 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC093655.2-201ENST00000425735 631 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 CRIP1P1-201ENST00000427567 185 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC092647.3-201ENST00000443044 633 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 IGBP1P3-201ENST00000447449 1000 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC092754.1-201ENST00000472975 479 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 BRD9P1-201ENST00000529855 560 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC063949.1-201ENST00000552900 865 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC009117.1-201ENST00000563948 554 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 U1.25-201ENST00000614085 162 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 U1.34-201ENST00000618578 162 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 U1.31-201ENST00000620022 160 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 AC011933.2-201ENST00000578539 2790 ntBASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42BPAQ5VT25 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms