Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC27Q2M243 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC27Q2M243 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC27Q2M243 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CCDC27Q2M243 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC27Q2M243 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC27Q2M243 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC27Q2M243 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CCDC27Q2M243 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC27Q2M243 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 MAPK10-261ENST00000641050 3109 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RNU4-31P-201ENST00000384211 141 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 MIR191-201ENST00000384873 92 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RNA5SP115-201ENST00000411160 107 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC023128.2-201ENST00000420880 1223 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC094019.1-201ENST00000434678 472 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC013403.1-201ENST00000436954 263 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 CR769776.1-201ENST00000441254 787 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC092685.1-201ENST00000447960 1243 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 TRY2P-201ENST00000448860 689 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 CALM1P2-201ENST00000452941 448 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 RPS27AP3-201ENST00000453803 454 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC098818.1-201ENST00000478593 252 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RN7SL568P-201ENST00000493069 298 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 MTCYBP35-201ENST00000503630 1137 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 CDH12P2-201ENST00000504393 298 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC021106.1-201ENST00000509020 1058 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC119751.5-201ENST00000514077 770 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RNA5SP206-201ENST00000516703 121 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC036111.2-201ENST00000533247 901 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 MRPS36P5-201ENST00000551909 298 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC012676.3-201ENST00000614983 479 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 MIR6811-201ENST00000620409 58 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC120349.3-201ENST00000624377 529 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 CU459211.1-201ENST00000635667 749 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC139713.2-210ENST00000641741 992 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC006213.6-201ENST00000623722 4179 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AL359195.2-201ENST00000623657 4412 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CCDC27Q2M243 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 CASC19-243ENST00000641588 1546 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AKAP17BP-201ENST00000431706 2719 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 AC010401.2-201ENST00000575137 4934 ntBASIC8.28□□□□□ -1.08
CCDC27Q2M243 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC27Q2M243 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC27Q2M243 AC011369.2-201ENST00000624423 1567 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 AC016251.2-201ENST00000623393 3089 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC27Q2M243 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC27Q2M243 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC27Q2M243 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC27Q2M243 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 MIR142-201ENST00000384835 87 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 AL139805.1-201ENST00000407837 289 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 RN7SKP121-201ENST00000410842 305 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 RN7SKP97-201ENST00000410966 333 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 AC010385.1-201ENST00000412374 256 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 OSTCP4-201ENST00000424397 449 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 FO393419.3-201ENST00000428741 282 ntBASIC8.27□□□□□ -1.09
CCDC27Q2M243 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC27Q2M243 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms