Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 AC022826.1-201ENST00000519383 805 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3AP84243 MRPS16P1-201ENST00000523462 412 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AC015689.2-201ENST00000528172 1738 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 HMGB1P42-201ENST00000532126 553 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3AP84243 AC139697.1-201ENST00000548429 745 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3AP84243 AC009962.1-201ENST00000567327 3813 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3AP84243 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3AP84243 MIR4433B-201ENST00000581329 102 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.1□□□□□ -1.59
H3F3AP84243 AC015802.2-201ENST00000589690 189 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 LSM1P2-201ENST00000604911 322 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AC090607.5-201ENST00000615692 224 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 AC091305.2-201ENST00000624049 1576 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
H3F3AP84243 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 AC020656.2-201ENST00000613291 5309 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.09□□□□□ -1.59
H3F3AP84243 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
H3F3AP84243 UGT2B24P-201ENST00000514441 1597 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 BRAFP1-201ENST00000445336 2703 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 RNA5SP453-201ENST00000362503 119 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 U3.10-201ENST00000364459 214 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 HMGB1P20-201ENST00000402555 677 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 TRGV5P-201ENST00000419915 354 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.09□□□□□ -1.59
H3F3AP84243 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 RPS3P2-201ENST00000421346 701 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 MTND6P12-201ENST00000428247 522 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 AC073109.1-201ENST00000445066 978 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 LRRC37A14P-201ENST00000452297 462 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.09□□□□□ -1.59
H3F3AP84243 UBFD1P1-201ENST00000473259 814 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AC021146.10-201ENST00000515628 706 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.09□□□□□ -1.59
H3F3AP84243 HSPE1P2-201ENST00000554777 306 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 AGGF1P7-201ENST00000562369 913 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 DHFRP1-201ENST00000579682 559 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AP001357.1-201ENST00000586304 1053 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 AL022394.1-201ENST00000606979 292 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 MIR6861-201ENST00000618657 64 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 AC087565.3-203ENST00000641018 837 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 MIR193BHG-214ENST00000641765 509 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AL359955.1-201ENST00000455242 3275 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3AP84243 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
H3F3AP84243 AP005435.3-201ENST00000531260 3198 ntBASIC5.09□□□□□ -1.59
H3F3AP84243 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
H3F3AP84243 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
H3F3AP84243 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
H3F3AP84243 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
H3F3AP84243 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
H3F3AP84243 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 AP000473.2-201ENST00000602659 1537 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3AP84243 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms