Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.3□□□□□ -1.72
CCL20P78556 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 AC017079.1-201ENST00000333650 415 ntBASIC4.3□□□□□ -1.72
CCL20P78556 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCL20P78556 AC092634.1-201ENST00000366505 199 ntBASIC4.3□□□□□ -1.72
CCL20P78556 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CCL20P78556 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCL20P78556 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCL20P78556 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCL20P78556 AL033519.1-201ENST00000407266 307 ntBASIC4.3□□□□□ -1.72
CCL20P78556 MIR1231-201ENST00000408101 92 ntBASIC4.3□□□□□ -1.72
CCL20P78556 MIR1271-201ENST00000408537 86 ntBASIC4.3□□□□□ -1.72
CCL20P78556 RN7SKP97-201ENST00000410966 333 ntBASIC4.3□□□□□ -1.72
CCL20P78556 MGAT2P2-201ENST00000427194 797 ntBASIC4.3□□□□□ -1.72
CCL20P78556 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.3□□□□□ -1.72
CCL20P78556 OR6R1P-201ENST00000431838 940 ntBASIC4.3□□□□□ -1.72
CCL20P78556 NPM1P23-201ENST00000440193 849 ntBASIC4.3□□□□□ -1.72
CCL20P78556 AL136455.1-201ENST00000441083 1240 ntBASIC4.3□□□□□ -1.72
CCL20P78556 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 AC073610.1-201ENST00000489971 396 ntBASIC4.3□□□□□ -1.72
CCL20P78556 DUTP7-201ENST00000507982 486 ntBASIC4.3□□□□□ -1.72
CCL20P78556 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.3□□□□□ -1.72
CCL20P78556 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.3□□□□□ -1.72
CCL20P78556 AC037479.1-201ENST00000558361 625 ntBASIC4.3□□□□□ -1.72
CCL20P78556 AC022884.2-201ENST00000578535 580 ntBASIC4.3□□□□□ -1.72
CCL20P78556 RN7SL435P-201ENST00000584418 282 ntBASIC4.3□□□□□ -1.72
CCL20P78556 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 AL034374.2-201ENST00000605281 548 ntBASIC4.3□□□□□ -1.72
CCL20P78556 AC022106.2-201ENST00000620114 757 ntBASIC4.3□□□□□ -1.72
CCL20P78556 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCL20P78556 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCL20P78556 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCL20P78556 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCL20P78556 AL359643.1-201ENST00000404109 423 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AL139805.1-201ENST00000407837 289 ntBASIC4.29□□□□□ -1.72
CCL20P78556 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 RN7SKP286-201ENST00000410894 299 ntBASIC4.29□□□□□ -1.72
CCL20P78556 RPS6P23-201ENST00000413224 722 ntBASIC4.29□□□□□ -1.72
CCL20P78556 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.29□□□□□ -1.72
CCL20P78556 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 KCTD9P1-201ENST00000430462 1167 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 AC010086.1-201ENST00000437359 1052 ntBASIC4.29□□□□□ -1.72
CCL20P78556 CYCSP24-201ENST00000445119 316 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AL450023.1-201ENST00000450868 751 ntBASIC4.29□□□□□ -1.72
CCL20P78556 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 RN7SL83P-201ENST00000468131 297 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC099521.1-201ENST00000482557 334 ntBASIC4.29□□□□□ -1.72
CCL20P78556 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 RPL12P30-201ENST00000488389 499 ntBASIC4.29□□□□□ -1.72
CCL20P78556 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.29□□□□□ -1.72
CCL20P78556 SUMO2P4-201ENST00000504193 276 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 IGKV1D-32-201ENST00000517449 318 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL20P78556 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC026333.4-201ENST00000613543 544 ntBASIC4.29□□□□□ -1.72
CCL20P78556 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms