Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 RN7SKP288-201ENST00000516227 268 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC130365.2-201ENST00000525882 1201 ntBASIC5.72□□□□□ -1.49
RAE1P78406 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 OR1E3-201ENST00000575608 948 ntBASIC5.72□□□□□ -1.49
RAE1P78406 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 OOSP1P2-201ENST00000579644 351 ntBASIC5.72□□□□□ -1.49
RAE1P78406 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.72□□□□□ -1.49
RAE1P78406 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 AC011500.1-201ENST00000601963 469 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AP001033.2-201ENST00000609701 1003 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AL109659.3-201ENST00000624985 950 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 AC097655.1-201ENST00000635075 318 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 AC027575.3-201ENST00000583058 2747 ntBASIC5.72□□□□□ -1.49
RAE1P78406 THAP12P9-201ENST00000503971 2360 ntBASIC5.72□□□□□ -1.49
RAE1P78406 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RAE1P78406 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAE1P78406 AL022323.4-201ENST00000623980 13120 ntBASIC5.71□□□□□ -1.49
RAE1P78406 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAE1P78406 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
RAE1P78406 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAE1P78406 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RAE1P78406 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAE1P78406 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RAE1P78406 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 RBMY1HP-201ENST00000382759 1389 ntBASIC5.71□□□□□ -1.5
RAE1P78406 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RAE1P78406 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 RNU1-134P-201ENST00000362935 165 ntBASIC5.71□□□□□ -1.5
RAE1P78406 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 TAF9BP2-201ENST00000400856 499 ntBASIC5.71□□□□□ -1.5
RAE1P78406 BX664727.1-201ENST00000416024 466 ntBASIC5.71□□□□□ -1.5
RAE1P78406 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 HYALP1-201ENST00000417674 1279 ntBASIC5.71□□□□□ -1.5
RAE1P78406 RPS7P8-201ENST00000418311 581 ntBASIC5.71□□□□□ -1.5
RAE1P78406 THEM7P-201ENST00000419556 672 ntBASIC5.71□□□□□ -1.5
RAE1P78406 NMD3P2-201ENST00000421815 761 ntBASIC5.71□□□□□ -1.5
RAE1P78406 RPL12P12-201ENST00000424633 501 ntBASIC5.71□□□□□ -1.5
RAE1P78406 BX119321.1-201ENST00000428912 797 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AC108479.1-201ENST00000431142 427 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AK3P5-201ENST00000432033 519 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 AC007383.1-201ENST00000445875 636 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 PPIAP7-201ENST00000454070 489 ntBASIC5.71□□□□□ -1.5
RAE1P78406 DUXAP8-207ENST00000456786 622 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 AC008379.1-201ENST00000463655 464 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AC115223.1-201ENST00000466377 870 ntBASIC5.71□□□□□ -1.5
RAE1P78406 RPS27P20-201ENST00000492051 246 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AP002453.1-201ENST00000492327 668 ntBASIC5.71□□□□□ -1.5
RAE1P78406 RN7SL362P-201ENST00000494228 267 ntBASIC5.71□□□□□ -1.5
RAE1P78406 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.71□□□□□ -1.5
RAE1P78406 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 AP000620.1-201ENST00000527147 504 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AL512310.9-201ENST00000553311 948 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 AL121839.1-201ENST00000556233 1185 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms