Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RPL39P62891 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 RNA5SP30-201ENST00000365552 115 ntBASIC3.85□□□□□ -1.79
RPL39P62891 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 RN7SKP146-201ENST00000410242 334 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AC211486.3-201ENST00000412694 621 ntBASIC3.85□□□□□ -1.79
RPL39P62891 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC3.85□□□□□ -1.79
RPL39P62891 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.85□□□□□ -1.79
RPL39P62891 HSPD1P12-201ENST00000429127 1069 ntBASIC3.85□□□□□ -1.79
RPL39P62891 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC007679.3-201ENST00000434035 414 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AC016772.1-201ENST00000444170 1261 ntBASIC3.85□□□□□ -1.79
RPL39P62891 OR52I1-201ENST00000450052 1050 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AL358876.1-201ENST00000453364 1075 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AC021660.1-201ENST00000465006 554 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AP000797.2-201ENST00000475768 606 ntBASIC3.85□□□□□ -1.79
RPL39P62891 RPS4XP17-201ENST00000479057 754 ntBASIC3.85□□□□□ -1.79
RPL39P62891 RN7SL273P-201ENST00000481561 299 ntBASIC3.85□□□□□ -1.79
RPL39P62891 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 AC009120.1-201ENST00000493458 473 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AC113367.2-201ENST00000505749 160 ntBASIC3.85□□□□□ -1.79
RPL39P62891 IMPA1P1-201ENST00000510718 842 ntBASIC3.85□□□□□ -1.79
RPL39P62891 RNA5SP96-201ENST00000516041 107 ntBASIC3.85□□□□□ -1.79
RPL39P62891 TMEM97P2-201ENST00000517841 403 ntBASIC3.85□□□□□ -1.79
RPL39P62891 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC3.85□□□□□ -1.79
RPL39P62891 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.85□□□□□ -1.79
RPL39P62891 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 AL078601.3-201ENST00000573303 535 ntBASIC3.85□□□□□ -1.79
RPL39P62891 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 FAM27E4-201ENST00000605259 342 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC073869.8-201ENST00000641806 335 ntBASIC3.85□□□□□ -1.79
RPL39P62891 SAMMSON-227ENST00000642114 1199 ntBASIC3.85□□□□□ -1.79
RPL39P62891 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC022417.1-201ENST00000624768 1303 ntBASIC3.85□□□□□ -1.79
RPL39P62891 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.85□□□□□ -1.79
RPL39P62891 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AF287957.1-201ENST00000607368 1595 ntBASIC3.85□□□□□ -1.79
RPL39P62891 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC3.84□□□□□ -1.79
RPL39P62891 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.84□□□□□ -1.79
RPL39P62891 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RPL39P62891 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 RNFT1P3-201ENST00000340898 1052 ntBASIC3.84□□□□□ -1.79
RPL39P62891 RNA5SP500-201ENST00000364486 119 ntBASIC3.84□□□□□ -1.79
RPL39P62891 YWHAZP6-201ENST00000399764 738 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC3.84□□□□□ -1.79
RPL39P62891 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 COX5BP7-201ENST00000414780 274 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.84□□□□□ -1.79
RPL39P62891 NENFP1-201ENST00000419476 466 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC090018.1-201ENST00000434369 367 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AL022324.2-201ENST00000434827 780 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.84□□□□□ -1.79
RPL39P62891 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC3.84□□□□□ -1.79
RPL39P62891 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC3.84□□□□□ -1.79
RPL39P62891 RN7SL254P-201ENST00000460609 284 ntBASIC3.84□□□□□ -1.79
RPL39P62891 RPSAP37-201ENST00000470913 821 ntBASIC3.84□□□□□ -1.79
RPL39P62891 RPS27P20-201ENST00000492051 246 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC023424.1-201ENST00000496058 459 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 PRMT5P1-201ENST00000514351 598 ntBASIC3.84□□□□□ -1.79
RPL39P62891 EIF3KP3-201ENST00000514461 639 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC100784.1-201ENST00000522790 310 ntBASIC3.84□□□□□ -1.79
RPL39P62891 PCNAP4-201ENST00000532690 730 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms