Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.85□□□□□ -1.47
NR1H2P55055 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 MAST4-IT1-201ENST00000514241 658 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC011853.1-201ENST00000518911 454 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC005363.1-201ENST00000530779 351 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC140063.1-201ENST00000541343 259 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 TDGP1-201ENST00000543961 1229 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.85□□□□□ -1.47
NR1H2P55055 MIR4310-201ENST00000582950 57 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.85□□□□□ -1.47
NR1H2P55055 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 AL499605.1-201ENST00000604628 403 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC135178.6-201ENST00000605314 398 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC004890.3-201ENST00000605566 1095 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AL450270.1-201ENST00000606160 391 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.85□□□□□ -1.47
NR1H2P55055 MIR6861-201ENST00000618657 64 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AC089999.3-201ENST00000622440 577 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 FO681491.1-202ENST00000623392 737 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.85□□□□□ -1.47
NR1H2P55055 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NR1H2P55055 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NR1H2P55055 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NR1H2P55055 AP001002.1-201ENST00000625148 1513 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NR1H2P55055 AL606537.1-201ENST00000607258 2011 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NR1H2P55055 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NR1H2P55055 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NR1H2P55055 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NR1H2P55055 RNA5SP140-201ENST00000364524 92 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 RNA5SP85-201ENST00000365378 119 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NR1H2P55055 AL590806.1-201ENST00000415818 853 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC019205.1-201ENST00000421830 730 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 BX119321.1-201ENST00000428912 797 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 KCTD9P1-201ENST00000430462 1167 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.84□□□□□ -1.47
NR1H2P55055 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 SDR42E1P3-201ENST00000438345 502 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 RPL23AP28-201ENST00000448062 470 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 AC116562.1-201ENST00000485355 781 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 RPS27P20-201ENST00000492051 246 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC106822.1-201ENST00000502647 526 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NR1H2P55055 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.84□□□□□ -1.47
NR1H2P55055 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.84□□□□□ -1.47
NR1H2P55055 OR8Q1P-201ENST00000526467 655 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.84□□□□□ -1.47
NR1H2P55055 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 MIR3189-201ENST00000578735 73 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC134669.1-201ENST00000581275 672 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.84□□□□□ -1.47
NR1H2P55055 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.84□□□□□ -1.47
NR1H2P55055 AL049840.5-201ENST00000602827 552 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC012676.3-201ENST00000614983 479 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 AC018692.2-201ENST00000624130 348 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NR1H2P55055 AC073593.1-201ENST00000624500 411 ntBASIC5.84□□□□□ -1.47
NR1H2P55055 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.84□□□□□ -1.47
NR1H2P55055 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.84□□□□□ -1.47
NR1H2P55055 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.84□□□□□ -1.47
NR1H2P55055 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NR1H2P55055 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NR1H2P55055 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.84□□□□□ -1.48
NR1H2P55055 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NR1H2P55055 AC096921.2-201ENST00000561507 1916 ntBASIC5.84□□□□□ -1.48
NR1H2P55055 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.83□□□□□ -1.48
NR1H2P55055 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NR1H2P55055 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 AC114774.1-201ENST00000507410 1770 ntBASIC5.83□□□□□ -1.48
NR1H2P55055 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NR1H2P55055 MIR323B-201ENST00000385269 82 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms