Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LIMK1P53667 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LIMK1P53667 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LIMK1P53667 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LIMK1P53667 RN7SKP124-201ENST00000364730 341 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AL645927.1-201ENST00000396783 406 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 RPL37P18-201ENST00000411602 243 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.97□□□□□ -1.45
LIMK1P53667 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.97□□□□□ -1.45
LIMK1P53667 CFL1P1-202ENST00000432948 411 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC097523.2-201ENST00000435551 652 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.97□□□□□ -1.45
LIMK1P53667 AC073850.1-201ENST00000449243 255 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AL606490.1-201ENST00000452266 765 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 RN7SL30P-201ENST00000488416 306 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 NENFP3-201ENST00000503735 313 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC091965.3-201ENST00000506236 208 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 RNU6-751P-201ENST00000516382 101 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.97□□□□□ -1.45
LIMK1P53667 OR4A46P-201ENST00000527255 933 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 HIGD1AP5-201ENST00000529959 259 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC073916.1-201ENST00000545095 130 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.97□□□□□ -1.45
LIMK1P53667 AC012254.3-201ENST00000591183 2117 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC138473.1-201ENST00000605717 526 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC022106.1-201ENST00000612834 766 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.97□□□□□ -1.45
LIMK1P53667 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.97□□□□□ -1.45
LIMK1P53667 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 TTC39DP-201ENST00000416781 1688 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 AC062022.1-201ENST00000451026 1684 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIMK1P53667 DOCK11P1-201ENST00000553480 5932 ntBASIC5.97□□□□□ -1.45
LIMK1P53667 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.96□□□□□ -1.45
LIMK1P53667 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.45
LIMK1P53667 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.96□□□□□ -1.45
LIMK1P53667 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.45
LIMK1P53667 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.96□□□□□ -1.45
LIMK1P53667 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.96□□□□□ -1.45
LIMK1P53667 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.96□□□□□ -1.45
LIMK1P53667 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LIMK1P53667 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.96□□□□□ -1.45
LIMK1P53667 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
LIMK1P53667 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.96□□□□□ -1.46
LIMK1P53667 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 SELENOWP1-201ENST00000322792 252 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 U3.23-201ENST00000391132 200 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 RPL35AP3-201ENST00000414680 288 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AC106901.1-201ENST00000425086 698 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AC113412.1-201ENST00000425840 504 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AC092017.2-201ENST00000427600 362 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.96□□□□□ -1.46
LIMK1P53667 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.96□□□□□ -1.46
LIMK1P53667 AL512593.1-201ENST00000444758 779 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.96□□□□□ -1.46
LIMK1P53667 OR2AO1P-201ENST00000476497 403 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AGGF1P3-201ENST00000493675 1213 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.96□□□□□ -1.46
LIMK1P53667 AC109481.1-201ENST00000509173 282 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.96□□□□□ -1.46
LIMK1P53667 RN7SKP34-201ENST00000516142 244 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.96□□□□□ -1.46
LIMK1P53667 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.96□□□□□ -1.46
LIMK1P53667 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.96□□□□□ -1.46
LIMK1P53667 AC090953.1-201ENST00000604305 1092 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 GMCL1P2-201ENST00000605230 823 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.96□□□□□ -1.46
LIMK1P53667 CU639417.4-201ENST00000623928 207 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.96□□□□□ -1.46
LIMK1P53667 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LIMK1P53667 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LIMK1P53667 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIMK1P53667 AL034546.1-201ENST00000623740 3693 ntBASIC5.96□□□□□ -1.46
LIMK1P53667 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.96□□□□□ -1.46
LIMK1P53667 AL359976.1-201ENST00000418655 3528 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 PABPC1P6-201ENST00000445594 1829 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.95□□□□□ -1.46
LIMK1P53667 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LIMK1P53667 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LIMK1P53667 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LIMK1P53667 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMK1P53667 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 AC016739.1-201ENST00000405359 345 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 RN7SKP125-201ENST00000410481 302 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 AC098592.2-201ENST00000413158 265 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.95□□□□□ -1.46
LIMK1P53667 AK4P4-201ENST00000419465 646 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms