Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PRELID1P1-201ENST00000403549 660 ntBASIC7.16□□□□□ -1.26
MRE11P49959 RPS3P2-201ENST00000421346 701 ntBASIC7.16□□□□□ -1.26
MRE11P49959 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.16□□□□□ -1.26
MRE11P49959 RPS27AP6-201ENST00000427962 448 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC073508.1-201ENST00000428866 656 ntBASIC7.16□□□□□ -1.26
MRE11P49959 HMGB3P5-201ENST00000428894 612 ntBASIC7.16□□□□□ -1.26
MRE11P49959 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 SEPT7P6-201ENST00000469999 1143 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.16□□□□□ -1.26
MRE11P49959 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 PPIAP19-201ENST00000486414 492 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC022206.1-201ENST00000495947 347 ntBASIC7.16□□□□□ -1.26
MRE11P49959 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.16□□□□□ -1.26
MRE11P49959 RPL7L1P4-201ENST00000513004 707 ntBASIC7.16□□□□□ -1.26
MRE11P49959 OR52H2P-201ENST00000514607 902 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC112198.4-201ENST00000515450 351 ntBASIC7.16□□□□□ -1.26
MRE11P49959 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC7.16□□□□□ -1.26
MRE11P49959 snoU109.5-201ENST00000516231 132 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.16□□□□□ -1.26
MRE11P49959 IGKV2D-38-201ENST00000518423 240 ntBASIC7.16□□□□□ -1.26
MRE11P49959 OR5D2P-201ENST00000524390 911 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.16□□□□□ -1.26
MRE11P49959 OR8Q1P-201ENST00000526467 655 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC139103.1-201ENST00000534696 1030 ntBASIC7.16□□□□□ -1.26
MRE11P49959 NANOGNBP2-201ENST00000544753 553 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.16□□□□□ -1.26
MRE11P49959 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.16□□□□□ -1.26
MRE11P49959 AL445383.1-201ENST00000554689 874 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.16□□□□□ -1.26
MRE11P49959 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.16□□□□□ -1.26
MRE11P49959 OOSP1P2-201ENST00000579644 351 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC002069.2-201ENST00000603580 883 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC073111.2-201ENST00000605657 1075 ntBASIC7.16□□□□□ -1.26
MRE11P49959 SNORA35B-201ENST00000607417 129 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AL008723.3-201ENST00000608926 449 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC117490.2-201ENST00000610042 594 ntBASIC7.16□□□□□ -1.26
MRE11P49959 SDR42E1P1-201ENST00000611327 477 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC010998.3-201ENST00000613871 631 ntBASIC7.16□□□□□ -1.26
MRE11P49959 AC127071.2-201ENST00000623293 527 ntBASIC7.16□□□□□ -1.26
MRE11P49959 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
MRE11P49959 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.16□□□□□ -1.26
MRE11P49959 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
MRE11P49959 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
MRE11P49959 LINC01613-201ENST00000561476 2780 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AP001541.1-201ENST00000623322 1904 ntBASIC7.15□□□□□ -1.26
MRE11P49959 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 SNORA58B-201ENST00000364259 136 ntBASIC7.15□□□□□ -1.26
MRE11P49959 RNU4-40P-201ENST00000364351 143 ntBASIC7.15□□□□□ -1.26
MRE11P49959 YWHAZP6-201ENST00000399764 738 ntBASIC7.15□□□□□ -1.26
MRE11P49959 PEX12P1-201ENST00000400284 1048 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AL359092.1-201ENST00000417156 265 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.15□□□□□ -1.26
MRE11P49959 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.15□□□□□ -1.26
MRE11P49959 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 AC099670.2-201ENST00000435130 321 ntBASIC7.15□□□□□ -1.26
MRE11P49959 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 AC073109.1-201ENST00000445066 978 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.15□□□□□ -1.26
MRE11P49959 AL356390.1-201ENST00000455684 397 ntBASIC7.15□□□□□ -1.26
MRE11P49959 NXT1P1-201ENST00000458481 316 ntBASIC7.15□□□□□ -1.26
MRE11P49959 RN7SL610P-201ENST00000463845 291 ntBASIC7.15□□□□□ -1.26
MRE11P49959 TRBV5-2-201ENST00000489095 273 ntBASIC7.15□□□□□ -1.26
MRE11P49959 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.15□□□□□ -1.26
MRE11P49959 IGLC4-201ENST00000517690 248 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC7.15□□□□□ -1.26
MRE11P49959 AC104997.1-201ENST00000519761 717 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AC244502.2-201ENST00000543361 851 ntBASIC7.15□□□□□ -1.26
MRE11P49959 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.15□□□□□ -1.26
MRE11P49959 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.15□□□□□ -1.26
MRE11P49959 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.15□□□□□ -1.26
MRE11P49959 AC090826.1-203ENST00000569235 490 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC7.15□□□□□ -1.26
MRE11P49959 OR7E18P-201ENST00000592589 702 ntBASIC7.15□□□□□ -1.26
MRE11P49959 SMIM12P1-201ENST00000603004 274 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 AC211433.2-201ENST00000608433 387 ntBASIC7.15□□□□□ -1.26
MRE11P49959 AC022467.1-201ENST00000614738 749 ntBASIC7.15□□□□□ -1.26
MRE11P49959 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.15□□□□□ -1.26
MRE11P49959 AC027559.1-201ENST00000636288 271 ntBASIC7.15□□□□□ -1.26
MRE11P49959 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.15□□□□□ -1.26
MRE11P49959 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
MRE11P49959 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MRE11P49959 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.15□□□□□ -1.27
MRE11P49959 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.15□□□□□ -1.27
MRE11P49959 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
MRE11P49959 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.15□□□□□ -1.27
MRE11P49959 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.27
MRE11P49959 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.27
MRE11P49959 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
MRE11P49959 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MRE11P49959 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
MRE11P49959 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.14□□□□□ -1.27
MRE11P49959 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms