Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NKX2-1P43699 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 RLIMP2-201ENST00000427891 1563 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AL359715.3-201ENST00000569267 2123 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NKX2-1P43699 Z86062.1-201ENST00000406773 777 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AL353133.1-201ENST00000407695 401 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 RN7SKP205-201ENST00000410999 307 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AL357078.2-201ENST00000416486 427 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AP003385.1-201ENST00000426387 893 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 GTF3AP6-201ENST00000432585 986 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 NPM1P18-201ENST00000434232 732 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 MTND2P21-201ENST00000436242 1042 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 MTND2P40-201ENST00000436718 841 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 SOCS5P1-201ENST00000440415 949 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC023271.1-201ENST00000445936 1090 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 RPL12P39-201ENST00000455456 496 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 RPSAP37-201ENST00000470913 821 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 RPS3AP49-201ENST00000472161 790 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC090424.1-201ENST00000535243 736 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 CKS1BP1-201ENST00000555221 240 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX2-1P43699 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.87□□□□□ -1.63
NKX2-1P43699 RN7SL32P-201ENST00000580514 281 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC119403.2-201ENST00000590960 598 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AL513327.3-201ENST00000602618 469 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC015712.7-201ENST00000615211 635 ntBASIC4.87□□□□□ -1.63
NKX2-1P43699 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NKX2-1P43699 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.87□□□□□ -1.63
NKX2-1P43699 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.87□□□□□ -1.63
NKX2-1P43699 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-1P43699 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC097461.1-201ENST00000568928 2821 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AL121950.1-201ENST00000624993 2077 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU1-5P-201ENST00000362684 144 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RN7SKP257-201ENST00000364525 309 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NKX2-1P43699 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 SNORA5.1-201ENST00000384275 131 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU6-1320P-201ENST00000390838 107 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU6-1269P-201ENST00000391139 107 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 GAPDHP15-201ENST00000398586 975 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 NPM1P37-201ENST00000403105 874 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 1030.7 ms