Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AC068870.1-201ENST00000563737 2455 ntBASIC5.88□□□□□ -1.47
SLC1A1P43005 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 SUGT1P2-201ENST00000379452 992 ntBASIC5.88□□□□□ -1.47
SLC1A1P43005 AL009179.1-201ENST00000406085 265 ntBASIC5.88□□□□□ -1.47
SLC1A1P43005 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AC073465.2-201ENST00000440938 498 ntBASIC5.88□□□□□ -1.47
SLC1A1P43005 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AZGP1P2-201ENST00000454506 345 ntBASIC5.88□□□□□ -1.47
SLC1A1P43005 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 OR8G3P-202ENST00000641572 1255 ntBASIC5.88□□□□□ -1.47
SLC1A1P43005 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SLC1A1P43005 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SLC1A1P43005 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SLC1A1P43005 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC1A1P43005 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC1A1P43005 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 AC018809.2-201ENST00000602436 3823 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AC004158.1-201ENST00000564508 4319 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 RNU1-65P-201ENST00000363919 148 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SLC1A1P43005 SEPT7P2-202ENST00000398921 823 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 GPS2P1-201ENST00000411761 986 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.87□□□□□ -1.47
SLC1A1P43005 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AL136231.1-201ENST00000429407 730 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 RPL7P56-201ENST00000429441 717 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 AC069154.1-201ENST00000432914 542 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AL359839.1-201ENST00000451975 1160 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AC009237.13-201ENST00000603193 276 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 uc_338.7-201ENST00000621834 124 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SLC1A1P43005 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SLC1A1P43005 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 MT-RNR2-201ENST00000387347 1559 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC1A1P43005 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SLC1A1P43005 AL359715.3-201ENST00000569267 2123 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 LINC01963-201ENST00000562038 3148 ntBASIC5.87□□□□□ -1.47
SLC1A1P43005 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SLC1A1P43005 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SLC1A1P43005 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SLC1A1P43005 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC1A1P43005 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC1A1P43005 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC1A1P43005 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC1A1P43005 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC1A1P43005 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC1A1P43005 TMSB4XP2-201ENST00000335179 210 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 AC004386.1-201ENST00000393214 761 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC1A1P43005 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC1A1P43005 VTI1BP4-201ENST00000427516 527 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 BX119904.3-201ENST00000428194 957 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.86□□□□□ -1.47
SLC1A1P43005 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC1A1P43005 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.86□□□□□ -1.47
SLC1A1P43005 AC087672.1-201ENST00000479876 766 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 AC021106.1-201ENST00000509020 1058 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC1A1P43005 AC091912.1-201ENST00000511351 248 ntBASIC5.86□□□□□ -1.47
SLC1A1P43005 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC1A1P43005 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC1A1P43005 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SLC1A1P43005 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.86□□□□□ -1.47
SLC1A1P43005 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms