Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.87□□□□□ -1.47
HTTP42858 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.87□□□□□ -1.47
HTTP42858 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.87□□□□□ -1.47
HTTP42858 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.87□□□□□ -1.47
HTTP42858 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.87□□□□□ -1.47
HTTP42858 AC133555.2-201ENST00000550213 292 ntBASIC5.87□□□□□ -1.47
HTTP42858 AC084824.1-201ENST00000550917 1005 ntBASIC5.87□□□□□ -1.47
HTTP42858 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.87□□□□□ -1.47
HTTP42858 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 AC006338.2-201ENST00000616864 791 ntBASIC5.87□□□□□ -1.47
HTTP42858 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HTTP42858 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC5.87□□□□□ -1.47
HTTP42858 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HTTP42858 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HTTP42858 AL359715.3-201ENST00000569267 2123 ntBASIC5.87□□□□□ -1.47
HTTP42858 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.87□□□□□ -1.47
HTTP42858 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.87□□□□□ -1.47
HTTP42858 RPS4XP16-201ENST00000427198 791 ntBASIC5.87□□□□□ -1.47
HTTP42858 RPL23AP1-201ENST00000428990 471 ntBASIC5.87□□□□□ -1.47
HTTP42858 AL365220.1-201ENST00000432923 399 ntBASIC5.87□□□□□ -1.47
HTTP42858 BMS1P19-201ENST00000433925 393 ntBASIC5.87□□□□□ -1.47
HTTP42858 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 RPL12P39-201ENST00000455456 496 ntBASIC5.87□□□□□ -1.47
HTTP42858 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.87□□□□□ -1.47
HTTP42858 AC137627.1-201ENST00000545761 289 ntBASIC5.87□□□□□ -1.47
HTTP42858 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.87□□□□□ -1.47
HTTP42858 AC009237.13-201ENST00000603193 276 ntBASIC5.87□□□□□ -1.47
HTTP42858 AC008785.1-201ENST00000624475 456 ntBASIC5.87□□□□□ -1.47
HTTP42858 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HTTP42858 AL137100.1-201ENST00000556703 1620 ntBASIC5.86□□□□□ -1.47
HTTP42858 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 RAD23BP1-201ENST00000421404 1227 ntBASIC5.86□□□□□ -1.47
HTTP42858 OSTCP1-201ENST00000455507 450 ntBASIC5.86□□□□□ -1.47
HTTP42858 PPIAP21-201ENST00000464473 501 ntBASIC5.86□□□□□ -1.47
HTTP42858 RPL12P20-201ENST00000475538 479 ntBASIC5.86□□□□□ -1.47
HTTP42858 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.86□□□□□ -1.47
HTTP42858 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.86□□□□□ -1.47
HTTP42858 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.86□□□□□ -1.47
HTTP42858 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HTTP42858 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC5.86□□□□□ -1.47
HTTP42858 AC007614.5-201ENST00000623424 8892 ntBASIC5.86□□□□□ -1.47
HTTP42858 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.86□□□□□ -1.47
HTTP42858 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HTTP42858 MIR105-1-201ENST00000385222 81 ntBASIC5.86□□□□□ -1.47
HTTP42858 RPL12P34-201ENST00000424532 479 ntBASIC5.86□□□□□ -1.47
HTTP42858 VN1R21P-201ENST00000426703 765 ntBASIC5.86□□□□□ -1.47
HTTP42858 AC013356.1-201ENST00000489027 564 ntBASIC5.86□□□□□ -1.47
HTTP42858 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.86□□□□□ -1.47
HTTP42858 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC5.86□□□□□ -1.47
HTTP42858 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.86□□□□□ -1.47
HTTP42858 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.86□□□□□ -1.47
HTTP42858 CCDC58P3-201ENST00000590792 430 ntBASIC5.86□□□□□ -1.47
HTTP42858 AC098935.2-201ENST00000604222 466 ntBASIC5.86□□□□□ -1.47
HTTP42858 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.86□□□□□ -1.47
HTTP42858 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HTTP42858 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 KARSP3-201ENST00000571212 1504 ntBASIC5.86□□□□□ -1.47
HTTP42858 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HTTP42858 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.86□□□□□ -1.47
HTTP42858 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 SNORA48.7-201ENST00000391302 135 ntBASIC5.85□□□□□ -1.47
HTTP42858 NPM1P33-201ENST00000438918 872 ntBASIC5.85□□□□□ -1.47
HTTP42858 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 AC034105.4-201ENST00000568304 277 ntBASIC5.85□□□□□ -1.47
HTTP42858 AC105254.2-201ENST00000603636 436 ntBASIC5.85□□□□□ -1.47
HTTP42858 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HTTP42858 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
HTTP42858 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HTTP42858 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 AC006600.2-201ENST00000624834 2506 ntBASIC5.85□□□□□ -1.47
HTTP42858 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms