Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SLC6A4P31645 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AC005522.1-201ENST00000395416 346 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 PCNPP4-201ENST00000414817 517 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 RPL23AP18-201ENST00000416139 468 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AC066692.1-201ENST00000421721 457 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 PTP4A1P7-201ENST00000423476 514 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 RPL34P27-201ENST00000428810 349 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 ELOCP13-201ENST00000443934 329 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 MTCO2P6-201ENST00000463134 685 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 HMGB1P3-201ENST00000502802 616 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AP003066.2-201ENST00000529375 555 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 NPM1P35-201ENST00000533043 868 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.3□□□□□ -1.4
SLC6A4P31645 NOP56P3-201ENST00000549457 385 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 OR4H6P-201ENST00000563771 921 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AP005119.1-201ENST00000580956 292 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 EIF1P5-201ENST00000585002 234 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC008507.2-201ENST00000588402 1176 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC098935.2-201ENST00000604222 466 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 QTRT1P1-201ENST00000604344 1078 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC026741.1-201ENST00000605892 482 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AL645933.2-201ENST00000606743 1207 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC124016.2-201ENST00000610058 665 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AC087683.2-201ENST00000611384 326 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.3□□□□□ -1.4
SLC6A4P31645 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SLC6A4P31645 OLMALINC-203ENST00000641087 3779 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.3□□□□□ -1.4
SLC6A4P31645 MTCO1P28-201ENST00000574177 1528 ntBASIC6.3□□□□□ -1.4
SLC6A4P31645 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.3□□□□□ -1.4
SLC6A4P31645 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SLC6A4P31645 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.29□□□□□ -1.4
SLC6A4P31645 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.29□□□□□ -1.4
SLC6A4P31645 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SLC6A4P31645 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SLC6A4P31645 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SLC6A4P31645 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
SLC6A4P31645 RNFT1P3-201ENST00000340898 1052 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SLC6A4P31645 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.29□□□□□ -1.4
SLC6A4P31645 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.29□□□□□ -1.4
SLC6A4P31645 HYALP1-201ENST00000417674 1279 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 RPS7P8-201ENST00000418311 581 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.29□□□□□ -1.4
SLC6A4P31645 NAP1L4P2-201ENST00000425958 899 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 ELOCP11-201ENST00000436690 332 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 ELOCP16-201ENST00000444494 332 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.29□□□□□ -1.4
SLC6A4P31645 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.29□□□□□ -1.4
SLC6A4P31645 BOLA3P3-201ENST00000505182 232 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 AC025458.1-201ENST00000506046 166 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.29□□□□□ -1.4
SLC6A4P31645 RN7SKP253-201ENST00000516424 309 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.29□□□□□ -1.4
SLC6A4P31645 EEF1A1P37-201ENST00000522748 715 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 TRIM77BP-201ENST00000524985 1119 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 OR6M2P-201ENST00000529831 871 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 OR4A40P-201ENST00000533878 948 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 OR8K4P-201ENST00000534608 872 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 AC139103.1-201ENST00000534696 1030 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.29□□□□□ -1.4
SLC6A4P31645 AC008147.3-201ENST00000548666 354 ntBASIC6.29□□□□□ -1.4
SLC6A4P31645 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms