Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.16□□□□□ -1.1
RXRBP28702 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RXRBP28702 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 Y_RNA.619-201ENST00000410951 90 ntBASIC8.16□□□□□ -1.1
RXRBP28702 TRIM60P17-201ENST00000415181 719 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.16□□□□□ -1.1
RXRBP28702 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.16□□□□□ -1.1
RXRBP28702 AC010099.3-201ENST00000423896 409 ntBASIC8.16□□□□□ -1.1
RXRBP28702 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 Z68868.1-201ENST00000429048 544 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC126120.1-201ENST00000431082 470 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC8.16□□□□□ -1.1
RXRBP28702 PSMD10P3-201ENST00000437000 448 ntBASIC8.16□□□□□ -1.1
RXRBP28702 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 AL390119.1-201ENST00000440329 312 ntBASIC8.16□□□□□ -1.1
RXRBP28702 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC8.16□□□□□ -1.1
RXRBP28702 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RXRBP28702 AL157884.3-201ENST00000448273 1184 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.16□□□□□ -1.1
RXRBP28702 BET1P1-201ENST00000482276 359 ntBASIC8.16□□□□□ -1.1
RXRBP28702 MTCO3P35-201ENST00000485582 781 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 AC010625.1-201ENST00000511296 403 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.16□□□□□ -1.1
RXRBP28702 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.16□□□□□ -1.1
RXRBP28702 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 AC074029.2-201ENST00000551045 634 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC8.16□□□□□ -1.1
RXRBP28702 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.16□□□□□ -1.1
RXRBP28702 AC010735.1-201ENST00000567305 1026 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC8.16□□□□□ -1.1
RXRBP28702 DEFB131E-202ENST00000602581 683 ntBASIC8.16□□□□□ -1.1
RXRBP28702 Z99497.2-201ENST00000603634 310 ntBASIC8.16□□□□□ -1.1
RXRBP28702 KATNBL1P5-201ENST00000605015 517 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC008115.3-201ENST00000614874 549 ntBASIC8.16□□□□□ -1.1
RXRBP28702 RN7SL544P-201ENST00000617232 284 ntBASIC8.16□□□□□ -1.1
RXRBP28702 RN7SL763P-201ENST00000620922 284 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.16□□□□□ -1.1
RXRBP28702 AC104985.3-201ENST00000623479 597 ntBASIC8.16□□□□□ -1.1
RXRBP28702 AC093648.1-201ENST00000623546 606 ntBASIC8.16□□□□□ -1.1
RXRBP28702 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RXRBP28702 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RXRBP28702 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
RXRBP28702 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RXRBP28702 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8.15□□□□□ -1.1
RXRBP28702 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 AC104837.1-201ENST00000444644 1587 ntBASIC8.15□□□□□ -1.1
RXRBP28702 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.15□□□□□ -1.1
RXRBP28702 AL356473.1-201ENST00000406203 1408 ntBASIC8.15□□□□□ -1.1
RXRBP28702 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 PDZK1P1-202ENST00000425209 1350 ntBASIC8.15□□□□□ -1.1
RXRBP28702 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RXRBP28702 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.15□□□□□ -1.1
RXRBP28702 RNA5SP350-201ENST00000363298 111 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RNA5SP500-201ENST00000364486 119 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RNU4-28P-201ENST00000364739 141 ntBASIC8.15□□□□□ -1.1
RXRBP28702 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
RXRBP28702 AC009804.1-201ENST00000400949 179 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.15□□□□□ -1.1
RXRBP28702 RPL35AP3-201ENST00000414680 288 ntBASIC8.15□□□□□ -1.1
RXRBP28702 QRSL1P2-201ENST00000418582 964 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AL359265.1-201ENST00000440296 795 ntBASIC8.15□□□□□ -1.1
RXRBP28702 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC8.15□□□□□ -1.1
RXRBP28702 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC8.15□□□□□ -1.1
RXRBP28702 ZNF619P1-201ENST00000446539 752 ntBASIC8.15□□□□□ -1.1
RXRBP28702 MORF4-201ENST00000447135 971 ntBASIC8.15□□□□□ -1.1
RXRBP28702 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC8.15□□□□□ -1.1
RXRBP28702 OR6C72P-201ENST00000451403 892 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC8.15□□□□□ -1.1
RXRBP28702 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.15□□□□□ -1.1
RXRBP28702 USP9YP25-201ENST00000457708 443 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RN7SL72P-201ENST00000460697 269 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RPL35AP19-201ENST00000469425 329 ntBASIC8.15□□□□□ -1.1
RXRBP28702 RN7SL57P-201ENST00000493687 290 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AC010468.3-201ENST00000508225 458 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AC087373.1-201ENST00000524920 491 ntBASIC8.15□□□□□ -1.1
RXRBP28702 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.15□□□□□ -1.1
RXRBP28702 AC118942.1-201ENST00000529674 1035 ntBASIC8.15□□□□□ -1.1
RXRBP28702 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms