Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC079395.2-201ENST00000610982 737 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 MIR6826-201ENST00000617808 98 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COL8A2P25067 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 AC109446.4-201ENST00000623235 2755 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL8A2P25067 DNM1P47-203ENST00000571780 12667 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC232271.1-201ENST00000602455 2715 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC140134.1-201ENST00000511830 3544 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL8A2P25067 RPS6P23-201ENST00000413224 722 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 NENFP1-201ENST00000419476 466 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 CRIP1P1-201ENST00000427567 185 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.78□□□□□ -1.64
COL8A2P25067 RPS26P39-201ENST00000469206 341 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 RN7SL177P-201ENST00000476596 299 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 RN7SL184P-201ENST00000488308 297 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.78□□□□□ -1.64
COL8A2P25067 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC027026.1-201ENST00000532323 742 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 AC126615.2-201ENST00000553003 515 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.78□□□□□ -1.64
COL8A2P25067 HSPE1P2-201ENST00000554777 306 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC007225.2-201ENST00000562529 256 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 MRPS21P7-201ENST00000566937 238 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 RBM22P12-201ENST00000567098 1255 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.78□□□□□ -1.64
COL8A2P25067 AL359513.1-201ENST00000614364 557 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 MAPK10-350ENST00000641777 965 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.78□□□□□ -1.64
COL8A2P25067 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL8A2P25067 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COL8A2P25067 CASC19-248ENST00000641674 1356 ntBASIC4.78□□□□□ -1.64
COL8A2P25067 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL8A2P25067 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
COL8A2P25067 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL8A2P25067 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL8A2P25067 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL8A2P25067 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL8A2P25067 AC104964.3-201ENST00000606115 2860 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL8A2P25067 RN7SKP162-201ENST00000363605 345 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL8A2P25067 MIR130A-201ENST00000385274 89 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 AL391422.1-201ENST00000402155 436 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 MARK2P12-201ENST00000420129 585 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL8A2P25067 AL590399.2-201ENST00000427536 309 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.77□□□□□ -1.65
COL8A2P25067 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.77□□□□□ -1.65
COL8A2P25067 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.77□□□□□ -1.65
COL8A2P25067 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 RPL35AP19-201ENST00000469425 329 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 RN7SL629P-201ENST00000489622 285 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 AC108693.1-201ENST00000496068 432 ntBASIC4.77□□□□□ -1.65
COL8A2P25067 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.77□□□□□ -1.65
COL8A2P25067 IGKV2-18-201ENST00000522607 343 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms